Team:Tokyo Metropolitan/Notebook/Fiber/2010/10/23

From 2010.igem.org

(Difference between revisions)
Line 7: Line 7:
===Experiment:Sequence===
===Experiment:Sequence===
-
'''material'''
 
-
For PCR
 
*bcsA (No.9)
*bcsA (No.9)
*Big Dye
*Big Dye
*primer
*primer
*DW
*DW
-
For Ethanol precipitation
 
*ethanol
*ethanol
*EDTA
*EDTA
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'''result'''
'''result'''
 +
bcsA wasn't inserted into pSB1C3...
bcsA wasn't inserted into pSB1C3...
-
 
-
 
-
<br/>
 
===Experiment:Colony PCR===
===Experiment:Colony PCR===

Revision as of 16:52, 25 October 2010


E.coli Fiber Project Notebook

August 2010
SUNMONTUEWEDTHUFRISAT
1 2 3 4 5 6 7
8 9 10 11 12 13 14
15 16 17 18 19 20 21
22 23 24 25 26 27 28
29 30 31
September 2010
SUNMONTUEWEDTHUFRISAT
1 2 3 4
5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30
October 2010
SUNMONTUEWEDTHUFRISAT
1 2
3 4 5 6 7 8 9
10 11 12 13 14 15 16
17 18 19 20 21 22 23
24 25 26 27 28 29 30
31

2010/10/23 Saturday (Naoto)

member

naoto and watachin

Experiment:Sequence

  • bcsA (No.9)
  • Big Dye
  • primer
  • DW
  • ethanol
  • EDTA
  • Hi-Di solution

procedure

  1. mix materials(DNA<50ng)
  2. PCR
  3. Add EDTA and Ethanol and put at room temperature (15min)
  4. centrifuge (8000rpm,30min) and throw away supernatant
  5. add ethanol again
  6. centrifuge (8000rpm,15min) and throw away supernatant
  7. add Hi-Di solution
  8. heat at 95℃
  9. transfer these sample to plate for sequence
  10. read sequence

result

bcsA wasn't inserted into pSB1C3...

Experiment:Colony PCR

material

  • colony of E.coli
    • bcsB:1~32
    • bcsC:33~64
    • bcsD:65~96

other materials were same as protocol3

procedure

see protocol3

result

From the length of bands

bcsC→No.54 and 64

bcsD→No.75

seem to be correct inserts