Team:Tokyo Metropolitan/Notebook/Fiber/2010/09/27

From 2010.igem.org

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(→Experiment:Electrophoreses of PCR productions)
 
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__NOTOC__
__NOTOC__
==2010/9/27 Monday (watachin)(bambi75)==
==2010/9/27 Monday (watachin)(bambi75)==
-
===PCR/bcsA and D(A.xylium)/bcsA,B and C(E.coli)===
+
===Experiment:PCR/bcsA and D(A.xylium)/bcsA,B and C(E.coli)===
-
:'''member'''
+
:'''Member'''
:watachin and bambi75
:watachin and bambi75
-
:'''materials,Procedure'''
+
:'''Materials,Procedure'''
:Same on August 23th.
:Same on August 23th.
:*95℃5min
:*95℃5min
Line 17: Line 17:
:（95℃～72℃/30cycle）
:（95℃～72℃/30cycle）
-
===Agarose Gels Electro-phoresis===
+
:see [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol3:PCR protocol3]
-
:'''member'''
+
===Experiment:Agarose Gels Electrophoresis===
 +
 
 +
:'''Member'''
:Same above
:Same above
Line 29: Line 31:
:PCR Product of insert is the above things.
:PCR Product of insert is the above things.
-
:===restriction enzyme digestion===
+
===Experiment:Restriction enzyme digestion===
-
:'''member'''
+
:'''Member'''
:Same above  
:Same above  
Line 39: Line 41:
:Same protocol <html><a href="https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#.E3.80.80restriction enzyme digestion">the protocol6</a></html>
:Same protocol <html><a href="https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#.E3.80.80restriction enzyme digestion">the protocol6</a></html>
-
:===Agarose Gels Electro-phoresis===
+
===Experiment:Agarose gel Electrophoresis===
-
:'''member'''
+
:'''Member'''
:Same above
:Same above
Line 47: Line 49:
:'''Materials and Procedure'''
:'''Materials and Procedure'''
-
:Same protocol on August 16th.
+
:Same <html><a href="https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#.E3.80.80Electrophoresis">protocol4</a></html>
-
:PCR Product of insert is the above things.
+
:PCR Production is the above things.
-
===Ligation===
+
===Experiment:Ligation===
-
:'''member'''
+
:'''Member'''
:Same above
:Same above
-
:'''materials and procedure'''
+
:'''Materials and Procedure'''
-
:Follow the protocol(Ligation).
+
:Follow [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol8:Ligation protocol8(Ligation)].
:*bcsB(E.coli)
:*bcsB(E.coli)
:*bcsC(E.coli)
:*bcsC(E.coli)
-
===Ligation and Transformation===
+
===Experiment:Ligation and Transformation===
-
:'''member'''
+
:'''Member'''
:Same above
:Same above
-
'''materials and procedure'''
+
:'''Materials and Procedure'''
:Same protocol on September 21st.
:Same protocol on September 21st.
-
===PCR/bcsQ and bcsEFG(E.coli)===
+
===Experimet:PCR/bcsQ and bcsEFG(E.coli)===
-
:'''member'''
+
:'''Member'''
:watachin and bambi75
:watachin and bambi75
-
:'''materials,Procedure'''
+
:'''Materials,Procedure'''
:Same on August 23th.
:Same on August 23th.
:*95℃5min
:*95℃5min
Line 87: Line 89:
:（95℃～72℃/30cycle）
:（95℃～72℃/30cycle）
-
===Agarose Gels Electro-phoresis===
+
===Experiment:Agarose Gels Electrophoresis===
-
:'''member'''
+
:'''Member'''
:Same above
:Same above
Line 98: Line 100:
:PCR Product of insert is the above things.
:PCR Product of insert is the above things.
-
===PCR===
+
===Experiment:PCR===
 +
:'''Member'''
 +
:watachin and bambi75
 +
 
 +
:'''Materials,Procedure'''
:PCR of A.xylinum bcsA,D and E.coli bcsA,B,C ,pSB1C3
:PCR of A.xylinum bcsA,D and E.coli bcsA,B,C ,pSB1C3
 +
:Same on August 23th.
 +
:*95℃5min
 +
:*95℃30sec
 +
:*55℃30sec
 +
:*72℃4min
 +
:*72℃5min
 +
:*10℃∞
 +
:（95℃～72℃/30cycle）
-
===Electrophoreses of PCR production===
+
:see [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol3:PCR protocol3]
 +
 
 +
===Experiment:Electrophoreses of PCR production===
 +
 
 +
:'''Member'''
 +
 
 +
:Same above
 +
 
 +
:'''Materials and Procedure'''
 +
 
 +
:Same protocol on August 16th.
 +
:PCR Product of insert is the above things.
:'''Result'''
:'''Result'''
Line 108: Line 133:
:[[Image:2010-09-27-01.jpg]]
:[[Image:2010-09-27-01.jpg]]
-
===Digestion===
+
===Experiment:Digestion===
:bcsA → XbaI,SpeI
:bcsA → XbaI,SpeI
Line 118: Line 143:
:pSB1C3 → XbaI, SpeI
:pSB1C3 → XbaI, SpeI
-
===Electrophoreses of PCR productions===
+
===Experiment:Electrophoreses of PCR productions===
 +
 
 +
:'''Member'''
 +
 
 +
:Same above
 +
 
 +
:'''Materials and Procedure'''
 +
 
 +
:Same protocol on August 16th.
 +
:PCR Product of insert is the above things.
:'''Result'''
:'''Result'''
-
[[Image:2010-09-27-02.jpg]]
+
:[[Image:2010-09-27-02.jpg]]
 +
===Experiment:DNA Purification===
 +
:'''member'''
-
===DNA Purification===
+
:naoto and watachin
-
===Ligation===
+
:'''procedure'''
-
===DNA Purification===
+
:see [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol6:DNA_Purification_with_silica_gel protocol6]
-
===Ligation===
+
===Experiment:Ligation===
 +
:'''Member'''
-
===Transfomation===
+
:Same above
-
===PCR===
+
:'''Materials and Procedure'''
 +
:Follow [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol8:Ligation protocol8(Ligation)].
-
===Electrophoreses of PCR productions===
+
===Experiment:DNA Purification===
 +
:'''member'''
 +
 
 +
:naoto and watachin
 +
 
 +
:'''procedure'''
 +
 
 +
:see [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol6:DNA_Purification_with_silica_gel protocol6]
 +
 
 +
===Experiment:Ligation===
 +
:'''Member'''
 +
 
 +
:Same above
 +
 
 +
:'''Materials and Procedure'''
 +
:Follow [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol8:Ligation protocol8(Ligation)].
 +
 
 +
===Experiment:Transfomation===
 +
 
 +
:'''Member'''
 +
:watachin
 +
 
 +
:'''Materials,Procedure'''
 +
:see [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol9:Transformation protocol9]
 +
 
 +
===Experiment:PCR===
 +
:'''Member'''
 +
:watachin
 +
 
 +
:'''Materials,Procedure'''
 +
:Same on August 23th.
 +
:*95℃5min
 +
:*95℃30sec
 +
:*55℃30sec
 +
:*72℃4min
 +
:*72℃5min
 +
:*10℃∞
 +
:（95℃～72℃/30cycle）
 +
 
 +
:see [https://2010.igem.org/Team:Tokyo_Metropolitan/Project/Fiber/Protocol#Protocol3:PCR protocol3]
 +
 
 +
===Experiment:Electrophoreses of PCR productions===
 +
:'''Member'''
 +
 
 +
:Same above
 +
 
 +
:'''Materials and Procedure'''
 +
 
 +
:Same protocol on August 16th.
 +
:PCR Product of insert is the above things.
'''Result'''
'''Result'''
-
[[Image:2010-09-27-03.jpg]]
+
:[[Image:2010-09-27-03.jpg]]
 +
 
 +
<br/>

Latest revision as of 16:55, 27 October 2010


E.coli Fiber Project Notebook

August 2010
SUNMONTUEWEDTHUFRISAT
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22 23 24 25 26 27 28
29 30 31
September 2010
SUNMONTUEWEDTHUFRISAT
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5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30
October 2010
SUNMONTUEWEDTHUFRISAT
1 2
3 4 5 6 7 8 9
10 11 12 13 14 15 16
17 18 19 20 21 22 23
24 25 26 27 28 29 30
31

2010/9/27 Monday (watachin)(bambi75)

Experiment:PCR/bcsA and D(A.xylium)/bcsA,B and C(E.coli)

Member
watachin and bambi75
Materials,Procedure
Same on August 23th.
  • 95℃5min
  • 95℃30sec
  • 55℃30sec
  • 72℃4min
  • 72℃5min
  • 10℃∞
（95℃～72℃/30cycle）
see protocol3

Experiment:Agarose Gels Electrophoresis

Member
Same above
Materials and Procedure
Same protocol the protocol4
PCR Product of insert is the above things.

Experiment:Restriction enzyme digestion

Member
Same above
Materials and Procedure
Same protocol the protocol6

Experiment:Agarose gel Electrophoresis

Member
Same above
Materials and Procedure
Same protocol4
PCR Production is the above things.

Experiment:Ligation

Member
Same above
Materials and Procedure
Follow protocol8(Ligation).
  • bcsB(E.coli)
  • bcsC(E.coli)

Experiment:Ligation and Transformation

Member
Same above
Materials and Procedure
Same protocol on September 21st.

Experimet:PCR/bcsQ and bcsEFG(E.coli)

Member
watachin and bambi75
Materials,Procedure
Same on August 23th.
  • 95℃5min
  • 95℃30sec
  • 55℃30sec
  • 72℃4min
  • 72℃5min
  • 10℃∞
（95℃～72℃/30cycle）

Experiment:Agarose Gels Electrophoresis

Member
Same above
Materials and Procedure
Same protocol on August 16th.
PCR Product of insert is the above things.

Experiment:PCR

Member
watachin and bambi75
Materials,Procedure
PCR of A.xylinum bcsA,D and E.coli bcsA,B,C ,pSB1C3
Same on August 23th.
  • 95℃5min
  • 95℃30sec
  • 55℃30sec
  • 72℃4min
  • 72℃5min
  • 10℃∞
（95℃～72℃/30cycle）
see protocol3

Experiment:Electrophoreses of PCR production

Member
Same above
Materials and Procedure
Same protocol on August 16th.
PCR Product of insert is the above things.
Result
2010-09-27-01.jpg

Experiment:Digestion

bcsA → XbaI,SpeI
bcsB → XbaI
bcsC → SpeI
pSB1C3 → XbaI, SpeI

Experiment:Electrophoreses of PCR productions

Member
Same above
Materials and Procedure
Same protocol on August 16th.
PCR Product of insert is the above things.
Result
2010-09-27-02.jpg

Experiment:DNA Purification

member
naoto and watachin
procedure
see protocol6

Experiment:Ligation

Member
Same above
Materials and Procedure
Follow protocol8(Ligation).

Experiment:DNA Purification

member
naoto and watachin
procedure
see protocol6

Experiment:Ligation

Member
Same above
Materials and Procedure
Follow protocol8(Ligation).

Experiment:Transfomation

Member
watachin
Materials,Procedure
see protocol9

Experiment:PCR

Member
watachin
Materials,Procedure
Same on August 23th.
  • 95℃5min
  • 95℃30sec
  • 55℃30sec
  • 72℃4min
  • 72℃5min
  • 10℃∞
（95℃～72℃/30cycle）
see protocol3

Experiment:Electrophoreses of PCR productions

Member
Same above
Materials and Procedure
Same protocol on August 16th.
PCR Product of insert is the above things.


Result

2010-09-27-03.jpg

Retrieved from "http://2010.igem.org/Team:Tokyo_Metropolitan/Notebook/Fiber/2010/09/27"