Team:Tokyo Metropolitan/Notebook/Fiber/2010/08/12

From 2010.igem.org

(Difference between revisions)
(→Experiment:PCR)
 
(5 intermediate revisions not shown)
Line 1: Line 1:
-
{{:Team:Tokyo_Metropolitan/Header}}
+
{{:Team:Tokyo_Metropolitan/Notebook/Fiber}}
-
==2010/08/12 Tuesday (Bambi75)
+
==2010/08/12 Tuesday (Bambi75)==
===Experiment:PCR===
===Experiment:PCR===
-
'''member'''
+
:'''Member'''
-
NEX , bambi75 and watachin
+
-
'''Materials'''
+
:NEX , bambi75 and watachin
-
*sterilized water 106.5μl
+
-
*Ex taq buffer 15μl
+
-
*dNTP 12μl
+
-
*Ex taq 1.5μl
+
-
*K12bcsA sense(10μmol/l)2.5μl
+
-
*K12bcsA antisense(10μmol/l)2.5μl
+
-
*K12bcsB sense(10μmol/l)2.5μl
+
-
*K12bcsB antisense(10μmol/l)2.5μl
+
-
*K12bcsC sense(10μmol/l)2.5μl
+
-
*K12bcsC antisense(10μmol/l)2.5μl
+
-
*E.coliK12strain
+
-
'''Equipment'''
+
:'''Materials'''
-
*thermal cycler
+
-
*vortex mixer
+
-
*PCR-tubes
+
-
*pipet tip
+
-
'''Procedure'''
+
:*sterilized water 106.5μl
-
1)mix materials : sterilized water , Ex taq buffer , dNTP and Ex taq.
+
:*Ex taq buffer 15μl
 +
:*dNTP 12μl
 +
:*Ex taq 1.5μl
 +
:*K12bcsA sense(10μmol/l)2.5μl
 +
:*K12bcsA antisense(10μmol/l)2.5μl
 +
:*K12bcsB sense(10μmol/l)2.5μl
 +
:*K12bcsB antisense(10μmol/l)2.5μl
 +
:*K12bcsC sense(10μmol/l)2.5μl
 +
:*K12bcsC antisense(10μmol/l)2.5μl
 +
:*E.coliK12strain
-
2)divide 1) into 3 tips.
+
:'''Equipment'''
 +
:*thermal cycler
 +
:*vortex mixer
 +
:*PCR-tubes
 +
:*pipette tip
-
3)mix K12bcsAsense , K12bcsAantisense and 2).
+
:'''Procedure'''
-
　mix K12bcsBsense , K12bcsBantisense and 2).
+
:1.mix materials : sterilized water , Ex taq buffer , dNTP and Ex taq and divide 1) into 3 tips.
 +
:2.mix K12bcsAsense , K12bcsAantisense and 2)<br/>
 +
:mix K12bcsBsense , K12bcsBantisense and 2)<br/>
 +
:mix K12bcsCsense , K12bcsCantisense and 2)<br/>
 +
:3.dip E.coliK12strain into 3).
 +
:4.setting tips and elongation in thermal cycler
 +
:*initialization 95℃ 3min
 +
:*denaturation 96℃1min
 +
:*annealing 55℃ 1min
 +
:*elongation 72℃ 5min  (30 cycles from 95℃ to 72℃)
 +
:*reaction stop 10℃
-
　mix K12bcsCsense , K12bcsCantisense and 2).
+
<br/>
-
 
+
-
4)dip E.coliK12strain into 3).
+
-
 
+
-
5)setting tips and elongation in thermal cycler
+
-
*initialization 95℃ 3min
+
-
*denaturation 96℃1min
+
-
*annealing 55℃ 5min
+
-
*elongation 72℃ 1min  (30 cycles from 95℃ to 72℃)
+
-
*reaction stop 10℃
+

Latest revision as of 21:24, 26 October 2010


E.coli Fiber Project Notebook

August 2010
SUNMONTUEWEDTHUFRISAT
1 2 3 4 5 6 7
8 9 10 11 12 13 14
15 16 17 18 19 20 21
22 23 24 25 26 27 28
29 30 31
September 2010
SUNMONTUEWEDTHUFRISAT
1 2 3 4
5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30
October 2010
SUNMONTUEWEDTHUFRISAT
1 2
3 4 5 6 7 8 9
10 11 12 13 14 15 16
17 18 19 20 21 22 23
24 25 26 27 28 29 30
31

2010/08/12 Tuesday (Bambi75)

Experiment:PCR

Member
NEX , bambi75 and watachin
Materials
  • sterilized water 106.5μl
  • Ex taq buffer 15μl
  • dNTP 12μl
  • Ex taq 1.5μl
  • K12bcsA sense(10μmol/l)2.5μl
  • K12bcsA antisense(10μmol/l)2.5μl
  • K12bcsB sense(10μmol/l)2.5μl
  • K12bcsB antisense(10μmol/l)2.5μl
  • K12bcsC sense(10μmol/l)2.5μl
  • K12bcsC antisense(10μmol/l)2.5μl
  • E.coliK12strain
Equipment
  • thermal cycler
  • vortex mixer
  • PCR-tubes
  • pipette tip
Procedure
1.mix materials : sterilized water , Ex taq buffer , dNTP and Ex taq and divide 1) into 3 tips.
2.mix K12bcsAsense , K12bcsAantisense and 2)
mix K12bcsBsense , K12bcsBantisense and 2)
mix K12bcsCsense , K12bcsCantisense and 2)
3.dip E.coliK12strain into 3).
4.setting tips and elongation in thermal cycler
  • initialization 95℃ 3min
  • denaturation 96℃1min
  • annealing 55℃ 1min
  • elongation 72℃ 5min (30 cycles from 95℃ to 72℃)
  • reaction stop 10℃

Retrieved from "http://2010.igem.org/Team:Tokyo_Metropolitan/Notebook/Fiber/2010/08/12"