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E.coli Pattern Formation Project Notebook

August 2010 SUN MON TUE WED THU FRI SAT 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31

September 2010 SUN MON TUE WED THU FRI SAT 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30

October 2010 SUN MON TUE WED THU FRI SAT 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31

Contents 1 2010/08/30 1.1 1：PCR 1.2 2：DNA Digestion 1.3 3：Electrophoresis 1.4 4：Electrophoresis 1.5 5：DNA Ligation 1.6 6：Electrophoresis

2010/08/30

1：PCR

＜Member＞
Mariko, Hitomi, Taka

＜Sample＞
・E-coli (having BBa_I13521 plasmid)

・E-coli (having BBa_K208017 plasmid)

・E-coli JM109 (NIPPON GENE)

＜Protocol＞
See Protocol 2

・Tube (temperature in annealing)
1.Promoter~signal (72.0℃)
3. mRFP~Terminator (69.0)
4. Promoter (70.0)
5. RBS~signal (70.0)
7. Terminator (69.0/67.5/66.0)
8. CRP (72.5)

Total 8 tubes.

2：DNA Digestion

＜Member＞
nito

＜Sample, Materials＞
・PCR productions

• 1L(8/25) 8μl
• 2L(8/26) 8μl
• 4H(8/26) 16μl
• 5H(8/26) 16μl

・Digest enzyme

• AvrⅡ
• NheⅠ
• SpeⅠ

＜Protocol＞
See Protocol 9

3：Electrophoresis

＜Member＞
Mariko, Taka

＜Sample＞
・PCR products

＜Protocol＞
SeeProtocol 8

＜Result＞

4：Electrophoresis

＜Member＞
nito

＜Sample＞

• 1L(8/25)
• 2L(8/26)
• 4H(8/26)
• 5H(8/26)

(after digestion)

＜Protocol＞
SeeProtocol 8

And cut off gels included DNA.

＜Result＞

5：DNA Ligation

＜Member＞
nito

＜Sample＞

• 1L(8/25)
• 2L(8/26)
• 4H(8/26)
• 5H(8/26)

(after digestion)

＜Protocol＞
See Protocol 3

We ligated 1 and 2, 4 and 5.

6：Electrophoresis

＜Member＞
nito

＜Sample＞

• 1L(8/25)
• 2L(8/26)
• 4H(8/26)
• 5H(8/26)

(after ligation)

＜Protocol＞
SeeProtocol 8

＜Result＞