Team:USTC Software/notebook

From 2010.igem.org

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技术贴：
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{{Team:USTC_Software/Header}}
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by liaochen
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<html>
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<style type="text/css">
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table.calendar          { margin: 0; padding: 10px; }
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table.calendar td      { margin: 0; padding: 2px; vertical-align: top; }
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table.month .heading td { padding:2px; background-color:#66b3ff; color:#ffffff;
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text-align:center; font-size:120%; font-weight:bold; }
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table.month .dow td    { color:#000000; text-align:center; font-size:110%; }
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table.month td.today    { background-color:#66b3ff; }
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table.month td {
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border: none;
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margin: 0;
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padding: 1pt 1.5pt;
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font-weight: bold;
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font-size: 100%;
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text-align: right;
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background-color: white;
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}
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#bodyContent table.month a {
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background:none; padding:0 }
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.day-active { color:#0000aa }
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.day-empty  { color:#aaa }
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http://www.oracle.com/technology/global/cn/products/berkeley-db/xml/index.html 下载BDB （Berkerly DB XML 2.5)，可以很好支持XML文件的查找与插入，删除，索引操作，既支持命令行也支持应用程序的调用。
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</style>
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</html>
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==Monthly Notebook==
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{| style="background-color:white; " align="center" border="1"
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|-valign="top"
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_3 March]
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_4 April]
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_5 May]
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_6 June]
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|-valign="top"
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_7 July]
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_8 August]
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_9 September]
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|width=200px; align="center" |[https://2010.igem.org/Team:USTC_Software/notebook_10 October]
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|}
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在BDB中，所有的文件存在container中，这些container实际上是XML文档和其他信息的集合，它即可作为整个文档（一个单元）存储，又可作为许多结点存储－－这时整个文档分解为一个一个小的结点。
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==Daily Notebook==
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{| style="background-color:#ffffff;" align="center" border="1""
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这个软件的安装比较诡异，在install/bin/里面有dbxml的命令，直接输入（我是运行完外面的build.sh后才运行的，安装时间暴长...)。这时出现prompt。注意：每一个xml文档都存在container中，container是xml文档的集合，它还包括索引，metadata（data about data)。我们首先要创建一个container对象：
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|-valign="top"
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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dbxml> createContainer <CONTAINER NAME>
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=03 }}
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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这里不像mysql需要打开数据库（use <database name>），DBD会自动为我们打开。DBD管理文档的格式不是组织关系数据库，无须像mysql一样要定义每一个表的格式，比如create table phonebook values (id INT(3) not null, varchar(120)...)，它直接输入xml格式的文件即可：
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=04 }}
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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dbxml> putDocument phone1 '<phonebook>
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=05 }}
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<name>
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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<first> liao </first>
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=06 }}
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<second> chen </second>
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|-valign="top"
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</name>
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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<phone type="mobile">xxxxx5873</phone>
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=07 }}
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</phonebook>' s
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=08 }}
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这里要注意三点，第一是这种格式的输入（当然可以load文件）的xml文档是以单引号为起始终止限定符，第二是s结尾是说xml以string格式输入新的document，第三是它和mysql不一样，不用打分号作为一个语句的结束。
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=09 }}
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下面我门说XQuery，我们可以理解它和SQL SELECT语句是差不多的。XPATH是XQuery的中心实现，它就是一系列语句，用于查询XML文档数据集合的子集。
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|{{ #calendar: query=preload=Team:USTC_SOFTWARE/Template/Meetings
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|title=Team:USTC_SOFTWARE/Notebook/Meetings |year=2010 |month=10 }}
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|}

Latest revision as of 20:58, 25 October 2010

Monthly Notebook

March April May June
July August September October

Daily Notebook

March
MTWTFSS
1 2 3 4 5 6 7
8 9 10 11 12 13 14
15 16 17 18 19 20 21
22 23 24 25 26 27 28
29 30 31
April
MTWTFSS
      1 2 3 4
5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30
May
MTWTFSS
          1 2
3 4 5 6 7 8 9
10 11 12 13 14 15 16
17 18 19 20 21 22 23
24 25 26 27 28 29 30
31
June
MTWTFSS
  1 2 3 4 5 6
7 8 9 10 11 12 13
14 15 16 17 18 19 20
21 22 23 24 25 26 27
28 29 30
July
MTWTFSS
      1 2 3 4
5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30 31
August
MTWTFSS
            1
2 3 4 5 6 7 8
9 10 11 12 13 14 15
16 17 18 19 20 21 22
23 24 25 26 27 28 29
30 31
September
MTWTFSS
    1 2 3 4 5
6 7 8 9 10 11 12
13 14 15 16 17 18 19
20 21 22 23 24 25 26
27 28 29 30
October
MTWTFSS
        1 2 3
4 5 6 7 8 9 10
11 12 13 14 15 16 17
18 19 20 21 22 23 24
25 26 27 28 29 30 31
Retrieved from "http://2010.igem.org/Team:USTC_Software/notebook"