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Team:BIOTEC Dresden/Software
From 2010.igem.org
| Name | Description | Link |
|---|---|---|
| ApE | ApE was used as DNA construction software to create plasmid maps, fusion constructs and to view restriction sites of commonly used endonucleases | biologylabs.utah.edu/jorgensen/wayned/ape |
| NCBI Blast | The online software tool blast was used both to check nucleotide and protein sequences towards their homology to the original genomic sequence | blast.ncbi.nlm.nih.gov |
| Cell Designer | Cell Designer represents a tool for molecular modeling allowing to construct molecular circuits | www.celldesigner.org |
| PartsRegistry Sequence Analysis/BLAST | The registry blast was useful to identify nucleotide sequences already submitted to the registry | partsregistry.org/cgi/sequencing |
| PlasmaDNA | PlasmaDNA was used as a specific tool for the simulation of restriction digests as well as PCR reactions | research.med.helsinki.fi/plasmadna |
| Sequencher | Sequencer helped to analyze the sequencing results obtained | www.genecodes.com |
| Oligo Analyzer | Properties such as Tm, dimerization and secondary structures of designed primers were checked. | http://eu.idtdna.com |
