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Team:BIOTEC Dresden/Software
From 2010.igem.org
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| - | <td> | + | <td>OligoAnalyzer 3.1</td> |
| - | <td>Properties such as T<sub>m</sub>, dimerization and secondary structures of designed primers were | + | <td>Properties such as T<sub>m</sub>, dimerization and secondary structures of designed primers were identified </td> |
<td><a href="http://eu.idtdna.com/analyzer/applications/oligoanalyzer/Default.aspx">http://eu.idtdna.com</a></td> | <td><a href="http://eu.idtdna.com/analyzer/applications/oligoanalyzer/Default.aspx">http://eu.idtdna.com</a></td> | ||
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Latest revision as of 00:53, 28 October 2010
| Name | Description | Link |
|---|---|---|
| ApE | ApE was used as DNA construction software to create plasmid maps, fusion constructs and to view restriction sites of commonly used endonucleases | biologylabs.utah.edu/jorgensen/wayned/ape |
| NCBI Blast | The online software tool blast was used both to check nucleotide and protein sequences towards their homology to the original genomic sequence | blast.ncbi.nlm.nih.gov |
| Cell Designer | Cell Designer represents a tool for molecular modeling allowing to construct molecular circuits | www.celldesigner.org |
| PartsRegistry Sequence Analysis/BLAST | The registry blast was useful to identify nucleotide sequences already submitted to the registry | partsregistry.org/cgi/sequencing |
| PlasmaDNA | PlasmaDNA was used as a specific tool for the simulation of restriction digests as well as PCR reactions | research.med.helsinki.fi/plasmadna |
| Sequencher | Sequencer helped to analyze the sequencing results obtained | www.genecodes.com |
| OligoAnalyzer 3.1 | Properties such as Tm, dimerization and secondary structures of designed primers were identified | http://eu.idtdna.com |
