Team:Freiburg Software

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<b>Project Description</b><br />
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SynBioWave is an open-source, synthetic biological software suite based on Google’s communication tool Wave (wave.google.com). SynBioWave is made for collaborative research comprising parts design and documentation. Moreover, biologists can record and share the process of creating research data and perform basic tasks using SynBioWave. In addition, SynBioWave is a framework for developing Google Wave extensions with a strong focus on synthetic biological functionality. In the Wave, SynBioWave can be used like a gadget.
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<h1>SynBioWave 2.0 – A Collaborative Toolkit for Synthetic Biology</h1>
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The last year’s team of Freiburg built the SynBioWave robot and implemented it on the Google Wave server. This year we are going to improve the functions and availability of this innovative software tool. We want to create robots which provide additional and improved functions such as DNA to RNA translation or blast search robots. Furthermore we want to help Google Wave becoming more famous.
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Please find more informations at <a href="http://www.synbiowave.org" target="_blank">http://www.synbiowave.org</a>.
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SynBioWave is an open-source, Synthetic Biology software suite based on Google’s open-source communication tool Wave. SynBioWave enables research collaboration by real-time sharing of parts, design and documentation. Moreover, biologists can record and share the process of creating research data. Last year our team developed the basic SynBioWave robot. This year we ported the main program (Robot) to Wave API 2.0 and improved user friendliness, separated the input and output from the sequence database operations by creating a linked wave for data storage. We also provide the “blueprint-robot”, a framework easing new robot development. Furthermore, we are adding new functionality by creating add-on robots that perform tasks such as BLAST-searches, ORF-finding, translation, sequence alignments and restriction site mapping. The main robot is available at SynBioWave@appspot.com, the source code at <a href="http://synbiowave.sourceforge.net">http://synbiowave.sourceforge.net</a> and the homepage of the project is <a href="http://www.synbiowave.org">http://www.synbiowave.org</a>.
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This is a template page. READ THESE INSTRUCTIONS.
 
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You are provided with this team page template with which to start the iGEM season.  You may choose to personalize it to fit your team but keep the same "look." Or you may choose to take your team wiki to a different level and design your own wiki.  You can find some examples <a href="https://2009.igem.org/Help:Template/Examples">HERE</a>.
 
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You <strong>MUST</strong> have a team description page, a project abstract, a complete project description, a lab notebook, and a safety page.  PLEASE keep all of your pages within your teams namespace. 
 
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<div class="box_home" id="color_green"><a href="https://2010.igem.org/Team:Freiburg_Software/Team"><h5>Team</h5>
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<div class="box_home" id="color_yellow"><a href="https://2010.igem.org/Team:Freiburg_Software/Project"><h5>Project</h5>
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|You can write a background of your team here. Give us a background of your team, the members, etc.  Or tell us more about something of your choosing.
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<img src="https://static.igem.org/mediawiki/2010/d/de/Freiburg_software_10_synbiowave_logo_2.png" class="icons" /></a></div>
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''Tell us more about your project. Give us background.  Use this as the abstract of your project.  Be descriptive but concise (1-2 paragraphs)''
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|align="center"|[[Team:Freiburg_Software | Team Example]]
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<div class="box_home" id="color_red"><a href="https://2010.igem.org/Team:Freiburg_Software/User"><h5>User</h5>
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<div class="box_home" id="color_blue"><a href="https://2010.igem.org/Team:Freiburg_Software/Developer"><h5>Developer</h5>
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!align="center"|[[Team:Freiburg_Software|Home]]
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<img src="https://static.igem.org/mediawiki/2010/c/c1/Freiburg_software_10_developer_icon_2.png" class="icons" /></a></div>
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!align="center"|[[Team:Freiburg_Software/Team|Team]]
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!align="center"|[https://igem.org/Team.cgi?year=2010&team_name=Freiburg_Software Official Team Profile]
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<div class="box_home" id="color_red"><a href="http://www.synbiowave.org" target="blank"><h5>SynBioWave</h5>
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!align="center"|[[Team:Freiburg_Software/Project|Project]]
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<img src="https://static.igem.org/mediawiki/2010/b/b0/Freiburg_software_10_synbiowave_homepage.png" style="width: 130px; margin: 5px 0px 0px 10px;" /></a></div>
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!align="center"|[[Team:Freiburg_Software/Parts|Parts Submitted to the Registry]]
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!align="center"|[[Team:Freiburg_Software/Modeling|Modeling]]
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<div class="box_home" id="color_blue"><a href="http://wave.google.com" target="blank"><h5>Google Wave</h5>
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!align="center"|[[Team:Freiburg_Software/Notebook|Notebook]]
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<img src="https://static.igem.org/mediawiki/2010/d/db/Freiburg_software_10_google_wave_schrift.png" style="width: 130px; margin: 15px 0px 0px 15px;" /></a></div>
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!align="center"|[[Team:Freiburg_Software/Safety|Safety]]
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<div class="box_home" id="color_green"><a href="https://2009.igem.org/Team:Freiburg_software" target="blank"><h5>Freiburg_Software 2009</h5>
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<div class="box_home" id="color_yellow"><a href="http://sourceforge.net/projects/synbiowave/" target="blank"><h5>SourceForge</h5>
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<h1>Thank you for supporting and hosting us</h1>
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<a href="http://www.uni-freiburg.de/start-en.html?set_language=en" target="_blank"><img src="https://static.igem.org/mediawiki/2010/b/b8/Freiburg10_Uni-logo.jpg" class="sponsor" title="Uni Freiburg" width="180px" /></a>
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<a href="http://www.bioss.uni-freiburg.de/cms/index.php#" target="_blank"><img src="https://static.igem.org/mediawiki/2010/e/eb/Freiburg10_sponsors_bioss.jpg" class="sponsor" title="Bioss" width="325px" /></a>
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<a href="http://www.molbiotech.uni-freiburg.de/" target="_blank"><img src="https://static.igem.org/mediawiki/2010/9/9d/Freiburg10_Sponsor_KuK-Lab.png" class="sponsor" title="kuk.lab" width="120px" /></a>
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Latest revision as of 00:06, 28 October 2010

SynBioWave 2.0 – A Collaborative Toolkit for Synthetic Biology

SynBioWave is an open-source, Synthetic Biology software suite based on Google’s open-source communication tool Wave. SynBioWave enables research collaboration by real-time sharing of parts, design and documentation. Moreover, biologists can record and share the process of creating research data. Last year our team developed the basic SynBioWave robot. This year we ported the main program (Robot) to Wave API 2.0 and improved user friendliness, separated the input and output from the sequence database operations by creating a linked wave for data storage. We also provide the “blueprint-robot”, a framework easing new robot development. Furthermore, we are adding new functionality by creating add-on robots that perform tasks such as BLAST-searches, ORF-finding, translation, sequence alignments and restriction site mapping. The main robot is available at SynBioWave@appspot.com, the source code at http://synbiowave.sourceforge.net and the homepage of the project is http://www.synbiowave.org.

Thank you for supporting and hosting us

Retrieved from "http://2010.igem.org/Team:Freiburg_Software"