Team:Tokyo Tech/Project/Apple Reporter

From 2010.igem.org

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==Fragrance==
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====Highlight====
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We designed apple fragrance expression system with MpAAT1. Fig. 1.2.1 shows the outline of the system. MpAAT1 converts substrate and Acetyl CoA into apple fragrance. Acetyl CoA exists originally in E.coli cell.When 2-methyl butanol or butanol is added as substrates, 2-methylbutyl acetate or butyl acetate is produced and it gives off apple fragrance.
[[image:Tokyotech apple fregrance 1.png|500px|center|thumb|Fig. 1.2.1.  Apple fragrance expression system]]
[[image:Tokyotech apple fregrance 1.png|500px|center|thumb|Fig. 1.2.1.  Apple fragrance expression system]]
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We performed gas chromatography to confirm the production of the esters, and the results revealed that MpAAT1 successfully converted alcohol and Acetyl CoA into our target esters.
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====Result====
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We transformed MpAAT1(BBa_K395602) on PSB6 along with pTrX6 into E.coli BL21 DE3, and cultured after addition of alcohols(2-MeBuOH or BuOH) as substrates.
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After 12 hours of incubation, we extracted organic soution layer from the culture and analyzed by gas chromatography (Fig. 1.2.2). Peaks of the esters producing apple fragrance(2-MeBuOAc or BuOAc) were detected.   
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[[image:Tokyotech apple fragrance 2.png|500px|left|thumb|Fig. 1.2.2.  Gas chromatography analysis of apple fragrance expression system.]]
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We designed and constructed a system for apple fragrance production from intracellular metabolites (BBa_K395602). We analyzed cultures with the apple fragrance biosynthetic system for Butyl acetate and 2-methylbutyl acetate production and measured by gas chromatography.(A)Apple fragrance generator (BBa_K395602) in the presence of butanol produces measurable quantities of butyl acetate.(B)Apple fragrance generator (BBa_K395602) does not produce measurable quantities of butyl acetate in the absence of butanol.(C)For reference, we analyzed pure butyl acetate.(D)Apple fragrance generator (BBa_K395602) in the presence of 2-methyl butanol produces measurable quantities of 2-methylbutyl acetate.(E)Apple fragrance generator (BBa_K395602) in the absence of 2-methyl butanol does not produce measurable quantities of 2-methylbutyl acetate(F)For reference, we analyzed pure 2-metylbutyl acetate.(G)For negative control, we analyzed with no sample. Undecane was used as an internal standard for all samples.
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====Discussion====
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From the result of the experiment above, we can conclude that engineered E.coli successfully converted alcohols added as substrates into esters.
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Moreover, we synthesized MpAAT1 and esters using E.coli BL21 DE3 as a chassis, which was reported to be implausible in former report(s) (C.R. Shen, J.C. Liao. 2008).
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In 2008, C.R. Shen and J.C. Liao succeeded in synthesizing butanol from E.coli. If we take advantage of this engineered E.coli, we could produce apple fragrance ester without the addition of substrate.
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Revision as of 10:41, 25 October 2010

iGEM Tokyo Tech 2010 "E.coli with Humanity"

menu

Overview

1, Apple Reporter

2, Artificial Cooperation System

3, wolf coli

3-1, [[]]

3-2, [[]]

3-3, [[]]

5, [[]]


Contents

Apple Reporter

the expression of GFP

Color

over view

Carotenoids are natural organic pigments in plants and bacteria. Synthetic carotenoid pigments colored yellow, red or orange represent about 15-25% of the cost of production of commercial feed. Carotenoids are terpenoid based on a structure having the chemical formula C40H56. There are about 600 carotenoids, which perform a range of functions. For example, light energy absorption, protection against photo-damage, acting as antioxidants, and as precursor to other organic compounds such as vitaminA. Production of pigment has been worked in iGEM, and quite a few parts for synthesis of carotenoid-related compounds already exist in BioBricks Registry. Since the carotenoid synthetic pathway is huge, BioBricks Registry doesn’t cover all parts to complete the pathway. This time, we intorduced some new BioBrick parts to synthesize more various kinds of carotenoids. And we succeeded in synthesizing astaxanthin, one of the final metabolite of the pathway. Also, astaxanthin is not converted to vitaminA in the human body. Too much vitamin A is toxic for a human, but astaxanthin has lower toxicity. Furthermore, as the synthetic pathway is completed, it becomes possible to change the hue gradually by controlling the production of several carotenoids.

















Fragrance

Highlight

We designed apple fragrance expression system with MpAAT1. Fig. 1.2.1 shows the outline of the system. MpAAT1 converts substrate and Acetyl CoA into apple fragrance. Acetyl CoA exists originally in E.coli cell.When 2-methyl butanol or butanol is added as substrates, 2-methylbutyl acetate or butyl acetate is produced and it gives off apple fragrance.


Fig. 1.2.1. Apple fragrance expression system

We performed gas chromatography to confirm the production of the esters, and the results revealed that MpAAT1 successfully converted alcohol and Acetyl CoA into our target esters.


Result

We transformed MpAAT1(BBa_K395602) on PSB6 along with pTrX6 into E.coli BL21 DE3, and cultured after addition of alcohols(2-MeBuOH or BuOH) as substrates. After 12 hours of incubation, we extracted organic soution layer from the culture and analyzed by gas chromatography (Fig. 1.2.2). Peaks of the esters producing apple fragrance(2-MeBuOAc or BuOAc) were detected.


Fig. 1.2.2. Gas chromatography analysis of apple fragrance expression system.

We designed and constructed a system for apple fragrance production from intracellular metabolites (BBa_K395602). We analyzed cultures with the apple fragrance biosynthetic system for Butyl acetate and 2-methylbutyl acetate production and measured by gas chromatography.(A)Apple fragrance generator (BBa_K395602) in the presence of butanol produces measurable quantities of butyl acetate.(B)Apple fragrance generator (BBa_K395602) does not produce measurable quantities of butyl acetate in the absence of butanol.(C)For reference, we analyzed pure butyl acetate.(D)Apple fragrance generator (BBa_K395602) in the presence of 2-methyl butanol produces measurable quantities of 2-methylbutyl acetate.(E)Apple fragrance generator (BBa_K395602) in the absence of 2-methyl butanol does not produce measurable quantities of 2-methylbutyl acetate(F)For reference, we analyzed pure 2-metylbutyl acetate.(G)For negative control, we analyzed with no sample. Undecane was used as an internal standard for all samples.














Discussion

From the result of the experiment above, we can conclude that engineered E.coli successfully converted alcohols added as substrates into esters. Moreover, we synthesized MpAAT1 and esters using E.coli BL21 DE3 as a chassis, which was reported to be implausible in former report(s) (C.R. Shen, J.C. Liao. 2008). In 2008, C.R. Shen and J.C. Liao succeeded in synthesizing butanol from E.coli. If we take advantage of this engineered E.coli, we could produce apple fragrance ester without the addition of substrate.