"

From 2010.igem.org

Contents 1 Language specifications 2 History(optional) 3 Future work 3.1 New version of MoDeL

Language specifications

History(optional)

Future work

There is a long way to go

New version of MoDeL

Our beta version of MoDeL needs to be improved in several aspects. First, it does not support description of intra-molecular reactions. If it is applied, our software will become a useful tool to study the competition mechanism between intra-molecular and inter-molecular reactions. Second, only six kinds of substituent parts are far from meeting the demands of more accurate modeling and complex reaction mechanism. At present, substituent parts are limited to match only parts on one chain; they are not allowed to represent a structure with more than one chains and trees. This needs the extension of definition of substituent parts by designing a unified format with enough information. Third, transcription and translation reactions are handled differently with other reactions. It is necessary to modify MoDeL to incorporate description of transcription and translation reactions.