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		+	=Details=
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	An overview of species list is provided:		An overview of species list is provided:

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Revision as of 15:43, 27 October 2010

Details

An overview of species list is provided:

where each species with its specific identifier has its own meaning:

• 0:E_coli: E.Coli cell;
• 1:IPTG: IPTG in flask;
• 2:DNA: initial transformed plasmids;
• 3:IPTG: IPTG in E.Coli due to diffusion;
• 4:RNA: mRNA of tetR;
• 5:RNA: mRNA of lacI;
• 6:RNA: mRNA of cIlam;
• 7:tetR154: tetR protein;
• 8:lacI153: lacI protein;
• 9:cIlam156: lacI protein;
• 10:(tetR154)2: tetR dimer;
• 11:(lacI153)2: lacI dimer;
• 12:(cIlam156)2: cIlam dimer;
• 13:DNA;(tetR154)2: complex of tetR dimer binding to pTet gene of plasmid DNA;
• 14:(lacI153)4; lacI tetramer;
• 15:DNA;(cIlam156)2: complex of cIlam dimer binding to pCI gene of plasmid DNA;
• 16:DNA;(cIlam156)2;(tetR154)2: complex of plasmid of DNA with both pCI and pTet genes bound with cIlam dimer and tetR dimer;
• 17:DNA;(lacI153)4: complex of LacI tetramer binding to pLacI gene plasmid DNA;
• 18:DNA;(lacI153)4;(tetR154)2: complex of plasmid DNA with both pLacI and pTet genes bound with LacI tetramer and tetR dimer, respectively;
• 19:IPTG;(lacI153)4: complex of LacI tetramer binding to pLacI gene of plasmid DNA;
• 20:DNA;(cIlam156)2;(lacI153)4: complex of plasmid DNA with both pCI and placI genes bound with cIlam dimer and lacI tetramer, respectively;
• 21:DNA;(cIlam156)2;(lacI153)4;(tetR154)2: complex of plasmid DNA with both pCI, placI and pTet genes bound with cIlam dimer, lacI tetramer and tetR dimer, respectively;

Since there are 153 reactions in total, we only provide a screenshot (we strongly recommend users to run our example to learn more details about automatic modeling):