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Team:USTC Software/demo
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Using C-N Model we can model systems with great complexity | Using C-N Model we can model systems with great complexity | ||
==A simplest example with only E.coli== | ==A simplest example with only E.coli== | ||
| - | === | + | |
| + | ===introduction=== | ||
| + | As the simplest example, a model of a flask with only E.coli cells inside will be shown. Only one reaction will be considered: the replication of E.coli. However, it is not trivial. '''MoDeL''' enables users to add such an auto-catalytic replication reaction easily and conveniently. The minimal database used for this model could be download here. | ||
| + | |||
| + | ===database construction=== | ||
| + | We only provide key points regarded with construction of this minimal database. To add the auto-catalytic reaction in the Reaction container, a '''Species''' with only '''Part''' E.coli is required. It has the simplest '''Chain-Node''' model format: only one chain with one part and no trees. | ||
==Simple demo with plac and lacI and IPTG== | ==Simple demo with plac and lacI and IPTG== | ||
Revision as of 16:59, 13 October 2010
Using C-N Model we can model systems with great complexity
Contents |
A simplest example with only E.coli
introduction
As the simplest example, a model of a flask with only E.coli cells inside will be shown. Only one reaction will be considered: the replication of E.coli. However, it is not trivial. MoDeL enables users to add such an auto-catalytic replication reaction easily and conveniently. The minimal database used for this model could be download here.
database construction
We only provide key points regarded with construction of this minimal database. To add the auto-catalytic reaction in the Reaction container, a Species with only Part E.coli is required. It has the simplest Chain-Node model format: only one chain with one part and no trees.
