UIUC-Illinois-Software/14 August 2010

From 2010.igem.org

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=Weekly Lab Notebook=
=Weekly Lab Notebook=
===August 8 – August 14===
===August 8 – August 14===
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'''Colin''' -
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'''Jeremy''' - I spent this week installing more software on the server and debugging and improving all the new code that has been installed on it. The paths to every resource have to be updated to the new paths on the new machine.  Every feature of the new website has to be tested to see if they work.
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'''Anna''' – Had to go home for the week. Continued working on writing the COBRA script code and began writing a python script that will allow us to integrate the modeling with BioMORTAR. Looked at the coding for IMPtools and BioMortar to get the variable names to better incorporate the cellular modeling within the overall project

Latest revision as of 03:14, 28 October 2010

presenting the 2010 UIUC Software Team!

      • The notebook is organized into weeks. Click on the Saturday of each week to view that week's notebook entry
May
MTWTFSS
          [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/1_May_2010&action=edit 1] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/2_May_2010&action=edit 2]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/3_May_2010&action=edit 3] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/4_May_2010&action=edit 4] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/5_May_2010&action=edit 5] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/6_May_2010&action=edit 6] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/7_May_2010&action=edit 7] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/8_May_2010&action=edit 8] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/9_May_2010&action=edit 9]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/10_May_2010&action=edit 10] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/11_May_2010&action=edit 11] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/12_May_2010&action=edit 12] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/13_May_2010&action=edit 13] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/14_May_2010&action=edit 14] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/15_May_2010&action=edit 15] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/16_May_2010&action=edit 16]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/17_May_2010&action=edit 17] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/18_May_2010&action=edit 18] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/19_May_2010&action=edit 19] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/20_May_2010&action=edit 20] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/21_May_2010&action=edit 21] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/22_May_2010&action=edit 22] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/23_May_2010&action=edit 23]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/24_May_2010&action=edit 24] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/25_May_2010&action=edit 25] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/26_May_2010&action=edit 26] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/27_May_2010&action=edit 27] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/28_May_2010&action=edit 28] [http://2010.igem.org/UIUC-Illinois-Software/29_May_2010 29] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/30_May_2010&action=edit 30]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/31_May_2010&action=edit 31]
June
MTWTFSS
  [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/1_June_2010&action=edit 1] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/2_June_2010&action=edit 2] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/3_June_2010&action=edit 3] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/4_June_2010&action=edit 4] [http://2010.igem.org/UIUC-Illinois-Software/5_June_2010 5] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/6_June_2010&action=edit 6]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/7_June_2010&action=edit 7] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/8_June_2010&action=edit 8] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/9_June_2010&action=edit 9] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/10_June_2010&action=edit 10] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/11_June_2010&action=edit 11] [http://2010.igem.org/UIUC-Illinois-Software/12_June_2010 12] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/13_June_2010&action=edit 13]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/14_June_2010&action=edit 14] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/15_June_2010&action=edit 15] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/16_June_2010&action=edit 16] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/17_June_2010&action=edit 17] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/18_June_2010&action=edit 18] [http://2010.igem.org/UIUC-Illinois-Software/19_June_2010 19] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/20_June_2010&action=edit 20]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/21_June_2010&action=edit 21] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/22_June_2010&action=edit 22] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/23_June_2010&action=edit 23] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/24_June_2010&action=edit 24] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/25_June_2010&action=edit 25] [http://2010.igem.org/UIUC-Illinois-Software/26_June_2010 26] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/27_June_2010&action=edit 27]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/28_June_2010&action=edit 28] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/29_June_2010&action=edit 29] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/30_June_2010&action=edit 30]
July
MTWTFSS
      [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/1_July_2010&action=edit 1] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/2_July_2010&action=edit 2] [http://2010.igem.org/UIUC-Illinois-Software/3_July_2010 3] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/4_July_2010&action=edit 4]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/5_July_2010&action=edit 5] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/6_July_2010&action=edit 6] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/7_July_2010&action=edit 7] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/8_July_2010&action=edit 8] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/9_July_2010&action=edit 9] [http://2010.igem.org/UIUC-Illinois-Software/10_July_2010 10] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/11_July_2010&action=edit 11]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/12_July_2010&action=edit 12] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/13_July_2010&action=edit 13] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/14_July_2010&action=edit 14] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/15_July_2010&action=edit 15] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/16_July_2010&action=edit 16] [http://2010.igem.org/UIUC-Illinois-Software/17_July_2010 17] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/18_July_2010&action=edit 18]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/19_July_2010&action=edit 19] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/20_July_2010&action=edit 20] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/21_July_2010&action=edit 21] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/22_July_2010&action=edit 22] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/23_July_2010&action=edit 23] [http://2010.igem.org/UIUC-Illinois-Software/24_July_2010 24] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/25_July_2010&action=edit 25]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/26_July_2010&action=edit 26] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/27_July_2010&action=edit 27] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/28_July_2010&action=edit 28] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/29_July_2010&action=edit 29] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/30_July_2010&action=edit 30] [http://2010.igem.org/UIUC-Illinois-Software/31_July_2010 31]
August
MTWTFSS
            [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/1_August_2010&action=edit 1]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/2_August_2010&action=edit 2] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/3_August_2010&action=edit 3] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/4_August_2010&action=edit 4] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/5_August_2010&action=edit 5] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/6_August_2010&action=edit 6] [http://2010.igem.org/UIUC-Illinois-Software/7_August_2010 7] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/8_August_2010&action=edit 8]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/9_August_2010&action=edit 9] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/10_August_2010&action=edit 10] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/11_August_2010&action=edit 11] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/12_August_2010&action=edit 12] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/13_August_2010&action=edit 13] [http://2010.igem.org/UIUC-Illinois-Software/14_August_2010 14] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/15_August_2010&action=edit 15]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/16_August_2010&action=edit 16] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/17_August_2010&action=edit 17] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/18_August_2010&action=edit 18] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/19_August_2010&action=edit 19] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/20_August_2010&action=edit 20] [http://2010.igem.org/UIUC-Illinois-Software/21_August_2010 21] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/22_August_2010&action=edit 22]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/23_August_2010&action=edit 23] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/24_August_2010&action=edit 24] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/25_August_2010&action=edit 25] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/26_August_2010&action=edit 26] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/27_August_2010&action=edit 27] [http://2010.igem.org/UIUC-Illinois-Software/28_August_2010 28] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/29_August_2010&action=edit 29]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/30_August_2010&action=edit 30] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/31_August_2010&action=edit 31]
September
MTWTFSS
    [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/1_September_2010&action=edit 1] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/2_September_2010&action=edit 2] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/3_September_2010&action=edit 3] [http://2010.igem.org/UIUC-Illinois-Software/4_September_2010 4] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/5_September_2010&action=edit 5]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/6_September_2010&action=edit 6] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/7_September_2010&action=edit 7] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/8_September_2010&action=edit 8] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/9_September_2010&action=edit 9] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/10_September_2010&action=edit 10] [http://2010.igem.org/UIUC-Illinois-Software/11_September_2010 11] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/12_September_2010&action=edit 12]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/13_September_2010&action=edit 13] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/14_September_2010&action=edit 14] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/15_September_2010&action=edit 15] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/16_September_2010&action=edit 16] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/17_September_2010&action=edit 17] [http://2010.igem.org/UIUC-Illinois-Software/18_September_2010 18] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/19_September_2010&action=edit 19]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/20_September_2010&action=edit 20] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/21_September_2010&action=edit 21] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/22_September_2010&action=edit 22] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/23_September_2010&action=edit 23] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/24_September_2010&action=edit 24] [http://2010.igem.org/UIUC-Illinois-Software/25_September_2010 25] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/26_September_2010&action=edit 26]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/27_September_2010&action=edit 27] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/28_September_2010&action=edit 28] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/29_September_2010&action=edit 29] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/30_September_2010&action=edit 30]
October
MTWTFSS
        [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/1_October_2010&action=edit 1] [http://2010.igem.org/UIUC-Illinois-Software/2_October_2010 2] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/3_October_2010&action=edit 3]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/4_October_2010&action=edit 4] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/5_October_2010&action=edit 5] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/6_October_2010&action=edit 6] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/7_October_2010&action=edit 7] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/8_October_2010&action=edit 8] [http://2010.igem.org/UIUC-Illinois-Software/9_October_2010 9] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/10_October_2010&action=edit 10]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/11_October_2010&action=edit 11] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/12_October_2010&action=edit 12] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/13_October_2010&action=edit 13] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/14_October_2010&action=edit 14] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/15_October_2010&action=edit 15] [http://2010.igem.org/UIUC-Illinois-Software/16_October_2010 16] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/17_October_2010&action=edit 17]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/18_October_2010&action=edit 18] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/19_October_2010&action=edit 19] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/20_October_2010&action=edit 20] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/21_October_2010&action=edit 21] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/22_October_2010&action=edit 22] [http://2010.igem.org/UIUC-Illinois-Software/23_October_2010 23] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/24_October_2010&action=edit 24]
[http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/25_October_2010&action=edit 25] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/26_October_2010&action=edit 26] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/27_October_2010&action=edit 27] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/28_October_2010&action=edit 28] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/29_October_2010&action=edit 29] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/30_October_2010&action=edit 30] [http://2010.igem.org/wiki/index.php?title=UIUC-Illinois-Software/31_October_2010&action=edit 31]

Weekly Lab Notebook

August 8 – August 14

Colin -

Jeremy - I spent this week installing more software on the server and debugging and improving all the new code that has been installed on it. The paths to every resource have to be updated to the new paths on the new machine. Every feature of the new website has to be tested to see if they work.

Anna – Had to go home for the week. Continued working on writing the COBRA script code and began writing a python script that will allow us to integrate the modeling with BioMORTAR. Looked at the coding for IMPtools and BioMortar to get the variable names to better incorporate the cellular modeling within the overall project

Retrieved from "http://2010.igem.org/UIUC-Illinois-Software/14_August_2010"