Team:SDU-Denmark/labnotes11

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(Lab notes (9/20 - 9/26))
 
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== Photosensor group ==
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=== Miniprep of PS (composit part) in pSB3T5 ===
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'''Date:''' 9/22 2010<br>
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'''Done By:''' Lc and Maria<br>
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'''Protocol:''' [https://2010.igem.org/Team:SDU-Denmark/protocols#MP1.2 MP1.2]<br>
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'''Notes:''' <br>
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col. N and J from the coloni PCR was selected and miniprep'ed according to protocol. Sample 1 of each colni was eluted in 20uL elution buffer, and sample 2 of each coloni was eluted according to protocol.<br>
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To ensure thet the plasimids contained the correct insert, the miniprep'ed plasmids were digested with EcoRI and PstI.<br>
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Restriction mixture:<br>
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12uL H2O<br>
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2uL FD green buffer<br>
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1uL EcoRI<br>
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1uL PstI<br>
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5uL Plasmid from either col. N or J<br>
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The samples are digested for 10 min. at 37C, and samples are loaded onto a 1% agarose gel. Undigested plasmid is used as controle and gene ruler DNA ladder mix is used as marker.<br>
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Loading scheme:<br>
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<table style="text-align: left;" border="1" cellpadding="2" cellspacing="2">
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    <tr>
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      <td>Lanes</td>
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      <td>Sample</td>
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    </tr>
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    <tr>
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      <td>1</td>
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      <td>marker</td>
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    </tr>
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    <tr>
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      <td>2</td>
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      <td>col. J&nbsp;</td>
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    </tr>
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    <tr>
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      <td>3</td>
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      <td>col J (uncut)</td>
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    </tr>
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    <tr>
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      <td>4</td>
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      <td>col N</td>
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    </tr>
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    <tr>
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      <td>5</td>
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      <td>col N (uncut)</td>
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    </tr>
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</table><br><br>
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'''Results:'''<br><br>
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'''Analysis:'''<br>
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Two bands are observed en the lanes of the digestes samples representing undigested plasmid and insert.<br>
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Miniprep samples are sent for sequencing and is stored at -20C.<br>
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--[[User:Tipi|Tipi]] 11:58, 30 September 2010 (UTC)<br><br>
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== Flagella Group ==
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=== Restriction Digest of FlhDCmut-B0015 and pSB3T5 with J13002 ===
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'''Date:''' 9/25 2010<br>
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'''Done By:''' Louise, Pernille and Sheila<br>
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'''Protocol:''' [https://2010.igem.org/Team:SDU-Denmark/protocols#RD1.1 RD1.1] and [https://2010.igem.org/Team:SDU-Denmark/protocols#DE1.3 DE1.3]<br>
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'''Notes:''' <br>
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'''Results:''' gel extraction<br>
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'''Conclusion:''' <br><br>
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=== Ligation of pSB3T5 with J13002 and FlhDCmut-B0015 ===
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'''Date:''' 9/25 2010<br>
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'''Done By:''' Louise, Pernille and Sheila<br>
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'''Protocol:''' [https://2010.igem.org/Team:SDU-Denmark/protocols#LG1.2 LG1.2]<br>
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'''Notes:''' Samples were prepared in the ratios 1:1, 1:2 and 1:4<br>
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'''Results:''' <br>
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'''Conclusion:''' <br><br>
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=== Transformation of FlhDCmut-B0015 inserted into pSB3T5 with J13002 ===
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'''Date:''' 9/26 2010<br>
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'''Done By:''' Louise and Sheila<br>
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'''Protocol:''' [https://2010.igem.org/Team:SDU-Denmark/protocols#CC1.1 CC1.1] and [https://2010.igem.org/Team:SDU-Denmark/protocols#TR1.1 TR1.1]<br>
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'''Notes:''' <br>
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'''Results:''' Can be seen [https://2010.igem.org/Team:SDU-Denmark/labnotes12#Colony_PCR_of_FlhDCmut_and_B0015_inserted_into_pSB3T5_with_J13002 here] and [https://2010.igem.org/Team:SDU-Denmark/labnotes12#Second_colony_PCR_of_FlhDCmut_and_B0015_inserted_into_pSB3T5_with_J13002 here].<br>
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'''Conclusion:''' <br><br>
</div>
</div>

Latest revision as of 11:58, 30 September 2010