Team:METU Turkey/References




== References ==

- He Y, Shelver D, Kerby R.L., and Roberts G.P. (1996). Characterization of a CO-responsive transcriptional activator from Rhodospirillum rubrum. The Journal of Biological Chemistry 1996; 271(5):120-123.

- Shelver D, Kerby R.L., He Y, and Roberts G.P. (1997). CooA, a CO-sensing transcription factor from Rhodospirillum rubrum, is a CO-binding heme protein. Proceedings of the National Academy of Sciences 1997; 94: 11216-20.

- Aono S, Ohkubo K, Matsuo T, and Nakajima T (1998). Redox-controlled ligand exchange of the Heme in the CO-sensing transcriptional activator CooA. The Journal of Biologycal Chemistry 1998; 273(40): 25757-64.

- Tippner D, and Wagner R (1995).Fluorescence analysis of the Escherichia coli transcription regulator H-NS reveals two distinguishable complexes dependent on binding to specific or nonspecific DNA sites. The Journal of Biological Chemistry 1995 Sep 22; 270(38): 22243-47.

- Kevin M, Balazsi G, Collins J (2007). Combinatorial promoter design for engineering noisy gene expression. Proceedings of the National Academy of Sciences 2007 July 31; 104(31): 12726-31.

- Berval K.S., Sreejith R.K., Pal J.K. (2010). Distance between RBS and AUG plays an important role in overexpression of recombinant proteins. Analytical Biochemistry 2010 Oct 15; 405(2): 275-277.

- Vooght K, Wijk R, Solinge W (2009). Management of gene promoter mutations in molecular diagnostics. Clinical Chemistry 2009 Feb 26; 55: 698-708.

- Leduc J, Thorsteinsson M, Gaal T, and Roberts G (2001). Mapping CooA-RNA Polymerase Interactions: Identification of activating regions 2 and 3 in CooA, the CO-sensing transcriptional activator. The Journal of Biological Chemistry 2001 Oct 26;276: 39968-39973 begin_of_the_skype_highlighting              39968-39973      end_of_the_skype_highlighting.

- Shelver D, Kerby R, He Y, and Roberts G (1995). Carbon Monoxide-Induced Activation of Gene Expression in Rhodospirillum rubrum Requires the Product of cooA, a Member of the Cyclic AMP Receptor Protein Family of Transcriptional Regulators. Journal of Bacteriology 1995 Apr; 177(8): 2157-63.

- He Y, Gaal T, Karls R, Donohue T, Gourse R, and Roberts G (1999). Transcription activation by CooA, the CO-sensing factor from Rhodospirillum rubrum. The interaction between CooA and the C-terminal domain of the alpha subunit of RNA polymerase. The Journal of Biological Chemistry 1999 Apr 16; 274(16): 10840-5.

- Youn H, Kerby R, Conrad M, and Roberts G (2004). Functionally Critical Elements of CooA-Related CO Sensors. Journal of Bacteriology 2004 Mar; 186(5): 1320-29.

- Nakajima H, Matsuo T, Tawara T, and Aono S (2000). Control of CooA activity by the mutation at the C-terminal end of the heme-binding domain. Journal of Inorganic Biochemistry 2000 Jan 31; 78: 63-68.

- Yamashita T, Hoashi Y, Watanabe K, Tomisugi Y, Ishikawa Y, and Uno T (2004). Roles of Heme Axial Ligands in the Regulation of CO Binding to CooA. The Journal of Biological Chemistry 2004 May 14; 279(20): 21394-400.

- Zhang K, Li X, Ma Y, Zou S, Yang L, and Zhang M (2010). A curve fitting method of quantifying green fluorescent protein expression level in Escherichia coli. Journal of Microbiological Methods 2010; 80: 172-177.

- Lissemore, J. & Bayes, J. & Calvey, M. & Reineke, L. & Colagiavanni, A. & Tscheiner, M. & Mascotti, D. (2009). Green fluorescent protein is superior to blue fluorescent protein as a quantitative reporter of promoter activity in E. Coli. Mol Biol Rep 2009 May; 36(5): 1107-12.

- Vooght, K. & Wijk, R. & Solinge W. (2009). Management of Gene Promoter Mutations in Molecular Diagnostics. Clinical Chemistry 2009; 55:698-708.

- Aono S (2003). Biochemical and Biophysical Properties of the CO-Sensing Transcriptional Activator CooA. Accounts of Chemical Research 2003; 36(11): 825-831.

- Berwal S.K., Sreejith R.K., Pal J.K. (2010). Distance between RBS and AUG plays an important role in overexpression of recombinant proteins. Analytical Biochemistry 2010; 405: 275-277.

- Brodie J, McEwan I.J. (2005). Intra-domain communication between the N-terminal and DNA-binding domains of the androgen receptor: modulation of androgen response element DNA binding. Journal of Molecular Endocrinology 2005 Jun; 34(3):603-15.

- Mergny J.L., Collier D, Rougée M, Montenay-Garestier T, Hélène C (1991). Intercalation of ethidium bromide into a triple-stranded oligonucleotide. Nucleic Acids Res. 1991 Apr 11; 19(7):1521-6.

- Shelver D, Thorsteinsson M.V., Kerby R.L., Chung S.Y., and Roberts G.P (1998). Identification of Two Important Heme Site Residues (Cysteine 75 and Histidine 77) in CooA, the CO-Sensing Transcription Factor of Rhodospirillum rubrum. Department of Bacteriology, UniVersity of WisconsinsMadison, Madison, Wisconsin 53706.