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Team:Cambridge/Software Tools
From 2010.igem.org
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[http://dinamelt.bioinfo.rpi.edu/hybrid2.php Trans interactions (e.g. Rcd)] | [http://dinamelt.bioinfo.rpi.edu/hybrid2.php Trans interactions (e.g. Rcd)] | ||
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| + | ===Codon optimisation=== | ||
| + | [http://genedesign.thruhere.net/cgi-bin/gd/gdCodJug.cgi Codon juggling tool, good compromise?] | ||
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| + | [http://www.genscript.com/cgi-bin/tools/rare_codon_analysis Rare codon analysis] | ||
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| + | [http://genomes.urv.cat/OPTIMIZER/ OPTIMIZER] | ||
==Downloadable tools== | ==Downloadable tools== | ||
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[http://dinamelt.bioinfo.rpi.edu/download.php UNA Fold for linux] offline version of DINAMelt, complex | [http://dinamelt.bioinfo.rpi.edu/download.php UNA Fold for linux] offline version of DINAMelt, complex | ||
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Latest revision as of 11:41, 18 August 2010
Logistics: Software Tools
Online Tools
Primer design
Calculating nucleic acid interactions
Cis-folding of DNA and Rcd (for primer design + Rcd)
Codon optimisation
Codon juggling tool, good compromise?
Downloadable tools
UNA Fold for linux offline version of DINAMelt, complex
