"
Team:Warsaw/Stage1/Modeling
From 2010.igem.org
(Difference between revisions)
| Line 11: | Line 11: | ||
<h2>Modeling</h2> | <h2>Modeling</h2> | ||
| - | <div class"note"> Available software</div> | + | <div class="note"> Available software</div> |
<p>People used to design computational programs that would automaticall locate bacterialribosome binding sittes, various techniques were used[] including neural networks[]. However the software was capable only of finding the sequence and didn't give any information about the strength of RBS. In 2009 Nature issue the revolutionary software has been described[]. RBS calculator allows prediction of RBS strength, | <p>People used to design computational programs that would automaticall locate bacterialribosome binding sittes, various techniques were used[] including neural networks[]. However the software was capable only of finding the sequence and didn't give any information about the strength of RBS. In 2009 Nature issue the revolutionary software has been described[]. RBS calculator allows prediction of RBS strength, | ||
moreover it designs RBS of desired strength for specific gene sequence. In 2010 another RBS strength predictor was created[]. | moreover it designs RBS of desired strength for specific gene sequence. In 2010 another RBS strength predictor was created[]. | ||
| - | <div class"note">Mathematics behind modeling</div> | + | <div class="note">Mathematics behind modeling</div> |
| + | <div class="note">Results</div> | ||
</p> | </p> | ||
<img src="https://static.igem.org/mediawiki/2010/2/29/RBSpredict_ania5MDP.png"> | <img src="https://static.igem.org/mediawiki/2010/2/29/RBSpredict_ania5MDP.png"> | ||
Revision as of 20:31, 26 October 2010
Modeling
Available software
People used to design computational programs that would automaticall locate bacterialribosome binding sittes, various techniques were used[] including neural networks[]. However the software was capable only of finding the sequence and didn't give any information about the strength of RBS. In 2009 Nature issue the revolutionary software has been described[]. RBS calculator allows prediction of RBS strength, moreover it designs RBS of desired strength for specific gene sequence. In 2010 another RBS strength predictor was created[].
Mathematics behind modeling
Results
Fig 1.
Fig 2.
