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Team:Warsaw/Stage1/Modeling
From 2010.igem.org
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<h2>Modeling</h2> | <h2>Modeling</h2> | ||
| - | <div class"note"> | + | <div class"note"> Available software</div> |
<p>People used to design computational programs that would automaticall locate bacterialribosome binding sittes, various techniques were used[] including neural networks[]. However the software was capable only of finding the sequence and didn't give any information about the strength of RBS. In 2009 Nature issue the revolutionary software has been described[]. RBS calculator allows prediction of RBS strength, | <p>People used to design computational programs that would automaticall locate bacterialribosome binding sittes, various techniques were used[] including neural networks[]. However the software was capable only of finding the sequence and didn't give any information about the strength of RBS. In 2009 Nature issue the revolutionary software has been described[]. RBS calculator allows prediction of RBS strength, | ||
moreover it designs RBS of desired strength for specific gene sequence. In 2010 another RBS strength predictor was created[]. | moreover it designs RBS of desired strength for specific gene sequence. In 2010 another RBS strength predictor was created[]. | ||
| - | + | <div class"note">Mathematics behind modeling</div> | |
</p> | </p> | ||
Revision as of 20:30, 26 October 2010
Modeling
Available software
People used to design computational programs that would automaticall locate bacterialribosome binding sittes, various techniques were used[] including neural networks[]. However the software was capable only of finding the sequence and didn't give any information about the strength of RBS. In 2009 Nature issue the revolutionary software has been described[]. RBS calculator allows prediction of RBS strength, moreover it designs RBS of desired strength for specific gene sequence. In 2010 another RBS strength predictor was created[].
Mathematics behind modeling
Fig 1.
Fig 2.
