Team:TU Delft/30 July 2010 content

From 2010.igem.org

(Difference between revisions)
(Alkane Sensing, Solvent Tolerance and Salt Tolerance)
(Alkane Sensing, Solvent Tolerance and Salt Tolerance)
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*10 min 68 C
*10 min 68 C
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Lane Description
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PCR reactions
{| style="color:black; background-color:white;" cellpadding="5" cellspacing="0" border="1"
{| style="color:black; background-color:white;" cellpadding="5" cellspacing="0" border="1"
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|MF + MR2
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Revision as of 10:06, 2 August 2010

Alkane Sensing, Solvent Tolerance and Salt Tolerance

by Pieter

I tried to assemble the remaining biobricks from various sub projects. The goal is to assemble the following:

  • AlkS + E0240
  • PalkB + J06702
  • J61101 + bbc1
  • J61101 + PhPFDalpha
  • J61101 + PhPFDbeta

To achieve this J06702, bbc1, PhPFDalpha and PhPFDbeta were amplified by PCR. The J61101 was cut open with S and P after which the biobricks were inserted. AlkS was inserted in the backbone with E0240.

PCR with PFX

Per sample the following mix was used:

  • 1,5 ul 10 mM dNTPs
  • 5 ul Enhancer
  • 5 ul 10x PFX Buffer
  • 1 ul 50 mM MgSO4
  • 3 ul 5 pmol/ul Forward Primer
  • 3 ul 5 pmol/ul Reverse Primer
  • 0.6 ul PFX Polymerase
  • 1 ul DNA Template
  • 29.9 ul H2O

PCR Program: start:

  • 2 min 95 C
  • 1 min 50 C
  • 1 min 68 C

repeated 25 times:

  • 1 min 95 C
  • 1 min 50 C
  • 1 min 68 C

end:

  • 10 min 68 C

PCR reactions

# Description Expected lenght (bp) Primer Status Remarks
1 J06702 869 G00100 + G00101
2 bbc1 703 MF + MR2
3 PhPFDalpha 528 MF + MR2
4 PhPFDbeta 430 MF + MR2