Team:HokkaidoU Japan/Notebook/August13
From 2010.igem.org
PCR of parts which didn't amplify well via mini prep
Composition of Reaction Solution
Reagent | Amount |
---|---|
Autoclaved DW : | 33 uL |
10x PCR buffer : | 5 uL |
2 mM dNTPs : | 5 uL |
25 mM MgSO4 : | 3 uL |
EX-F primer : | 1 uL |
PS-R primer : | 1 uL |
KOD plus Neo : | 1 uL |
Template (1-18F) : | 1 uL |
Total : | 50 uL |
Removal of Primers
- Added 150 uL of TE to 50 uL of PCR product, each
- Transfered into Microcon YM-10 filter and cetrifuged for 20 min at 14,000 G
- Much of the solution remained so centrifuged for aditional 10 min
- Measured the amount left
- It was 140 uL so centrifuged again for 10min
- And again
- Finally DNA solution was reduced to 19 uL so we added 31 uL to make final volume of 50 uL
Electrophoresis
- Added 0.4 uL of 6x Sample Buffer to 1 uL of DNA solution and electrophoresed it.
- At the same time add added 2 uL of 6x Sample Buffer to 10 uL of flow trough and centrifuged
- Used marker pUC119/Hinf
- It was confirmed that DNA was amplified by PCR
- Between marker bands of 543 bp and 1330 bp PCR product band of 700 bp was visible
- Due to negligence (electrophoresis for 45 min), flow through with primers flowed through and exited gel