An Elementary Model

We used Matlab and SimBiology for modeling. Lets begin with an easy model where Gene A is promoting Gene B. Its easier to model using the SimBiology desktop than the command interface. In Matlab command interface type "simbiology" to open the SimBiology desktop. Open a new project from file menu. Click next to go to the next step in the new window. In step 2 you can name the model. In step 3, select simulation model. Now from the Project Explorer which is in the left panel, expand SimBiology Model. Go to Diagram View. Here we can draw the network that will

Parameters

Simulation

References

• Baronas, Romas, Ivanauskas, Feliksas, Kulys, Juozas, Mathematical Modeling of Biosensors An Introduction for Chemists and Mathematicians, Springer Series on Chemical Sensors and Biosensors, Vol. 9, 2010, Springer.

• J. D. Murray, Mathematical Biology I: An Introduction, 2002, Springer.
• [http://www.mathworks.es/matlabcentral/fileexchange/20420| SimBiology Tutorial Webiner]