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WRONG!!!
Team
Overview
Students
Instructors
Advisors
Institutes
Gallery
miDANCE
Project
Abstract
Introduction
Synthetic miRNA Kit
Capsid Shuffling
Homology Based
ViroBytes
miMeasure
in vivo
Study
Summary & Outlook
References
Parts
Parts
Characterization
Modeling
Introduction
miBEAT
miRockdown
miBS designer
miCrappallo
Descriptions
Notebook
Synthetic miRNA Kit
Capsid Shuffling
Homology Based
ViroBytes
miMeasure
in vivo
Study
Modeling
Material
Methods
Psychological Survey
Philosophical Reflection
Biosafety
Human Practices
Psychological Survey
Philosophical Reflection
Sponsors
Modeling Notebook
Introduction Aastha
Notebook
April
29.04.2010
Meeting with Nao
Discuss about last years modeling approach
Problems to be avoided
Juli
13.06.2010
Discussion about first model idea
21.06.2010
Discussion about programming languages
Advantages of R, Perl and MatLab
Decision to use Perl and Matlab
Request for Matlab license
August
05.08.2010
Activation of MatLab-Accounts
09.08.2010
Meeting with Dr. König
Advantages and disadvantages of different modeling approaches
Possibility to use Neuronal Networks and Support Vektor Machines
http://en.wikipedia.org/wiki/Support_vector_machine
11.08.2010
Activation of MatLab fuzzy logic toolbox
18.08.2010
Meeting with Tim and Nao
Options to optimize a fuzzy logic model
22.08.2010
Telemeeting with Stephen Krämer
Advantages and limitations of a fuzzy logic
September
07.09.2010
Projectstart miBEAT
decision to create an interactive GUI on the wiki
creation of test model using javascript
Activation of MatLab neuro net toolbox
Projectstart Neuronal Network model
08.09.2010
Presentation of miBEAT project-concept on official team meeting
16-17.09.2010
6th Workshop on Computation of Biochemical Pathways and Genetic Networks
Parameter estimation in fuzzy/noisy systems
Global sensitivity analysis
New approaches to spatial modeling
Computation of microRNA regulatory network
Discussion with Professor Sanghamitra Bandyopadhyay from the Machine Intelligence Unit of the Indian Statistical Institute in Kolkata
Advise to use a Rough set modeling approach
http://en.wikipedia.org/wiki/Rough_set
28.09.2010
Project Start miRockdown
Developement of miRockdown concept
Decision on the use of the modified targetscan_50_context_scores–Algorithm for binding site evaluation
Contents
1
Modeling Notebook
1.1
Notebook
1.1.1
April
1.1.1.1
29.04.2010
1.1.2
Juli
1.1.2.1
13.06.2010
1.1.2.2
21.06.2010
1.1.3
August
1.1.3.1
05.08.2010
1.1.3.2
09.08.2010
1.1.3.3
11.08.2010
1.1.3.4
18.08.2010
1.1.3.5
22.08.2010
1.1.4
September
1.1.4.1
07.09.2010
1.1.4.2
08.09.2010
1.1.4.3
16-17.09.2010
1.1.4.4
28.09.2010