Team:Heidelberg/Notebook/Modeling
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{{:Team:Heidelberg/Template}} | {{:Team:Heidelberg/Template}} | ||
{{:Team:Heidelberg/Pagetop|note_modeling}} | {{:Team:Heidelberg/Pagetop|note_modeling}} | ||
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+ | =Modeling Notebook= | ||
+ | |||
+ | Introduction Aastha | ||
+ | |||
+ | ==Notebook== | ||
+ | |||
+ | ===April=== | ||
+ | ====29.04.2010=== | ||
+ | * Meeting with Nao | ||
+ | ** Discuss about last years modeling approach | ||
+ | ** Problems to be avoided | ||
+ | |||
+ | ===Juli=== | ||
+ | ====13.06.2010==== | ||
+ | * Discussion about first model idea | ||
+ | [[Image:First_model_concept_iGEM_Heidelberg.JPG|center|alt=The first model concept]] | ||
+ | |||
+ | |||
+ | ====21.06.2010==== | ||
+ | * Discussion about programming languages | ||
+ | ** Advantages of R, Perl and MatLab | ||
+ | ** Decision to use Perl and Matlab | ||
+ | ** Request for Matlab license | ||
+ | |||
+ | ===August=== | ||
+ | ====05.08.2010==== | ||
+ | * Activation of MatLab-Accounts | ||
+ | |||
+ | ====09.08.2010==== | ||
+ | * Meeting with Dr. König | ||
+ | ** Advantages and disadvantages of different modeling approaches | ||
+ | ** Possibility to use Neuronal Networks and Support Vektor Machines | ||
+ | *** http://en.wikipedia.org/wiki/Support_vector_machine | ||
+ | |||
+ | ====11.08.2010==== | ||
+ | * Activation of MatLab fuzzy logic toolbox | ||
+ | |||
+ | ====18.08.2010==== | ||
+ | * Meeting with Tim and Nao | ||
+ | ** Options to optimize a fuzzy logic model | ||
+ | |||
+ | ====22.08.2010==== | ||
+ | * Telemeeting with Stephen Krämer | ||
+ | ** Advantages and limitations of a fuzzy logic | ||
+ | |||
+ | ===September=== | ||
+ | ====07.09.2010==== | ||
+ | * Projectstart miBEAT | ||
+ | ** decision to create an interactive GUI on the wiki | ||
+ | ** creation of test model using javascript | ||
+ | * Activation of MatLab neuro net toolbox | ||
+ | ** Projectstart Neuronal Network model | ||
+ | |||
+ | ====08.09.2010==== | ||
+ | * Presentation of miBEAT project-concept on official team meeting | ||
+ | |||
+ | ====16-17.09.2010==== | ||
+ | * 6th Workshop on Computation of Biochemical Pathways and Genetic Networks | ||
+ | ** Parameter estimation in fuzzy/noisy systems | ||
+ | ** Global sensitivity analysis | ||
+ | ** New approaches to spatial modeling | ||
+ | ** Computation of microRNA regulatory network | ||
+ | * Discussion with Professor Sanghamitra Bandyopadhyay from the Machine Intelligence Unit of the Indian Statistical Institute in Kolkata | ||
+ | ** Advise to use a Rough set modeling approach | ||
+ | *** http://en.wikipedia.org/wiki/Rough_set | ||
+ | |||
+ | ====28.09.2010==== | ||
+ | * Project Start miRockdown | ||
+ | ** Developement of miRockdown concept | ||
+ | ** Decision on the use of the modified targetscan_50_context_scores–Algorithm for binding site evaluation | ||
+ | |||
{{:Team:Heidelberg/Pagemiddle}} | {{:Team:Heidelberg/Pagemiddle}} | ||
{{:Team:Heidelberg/Bottom}} | {{:Team:Heidelberg/Bottom}} |
Revision as of 18:59, 26 October 2010
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