Team:Newcastle/Transformation of B. subtilis
From 2010.igem.org
(Difference between revisions)
(→Protocol for Day 2) |
|||
(6 intermediate revisions not shown) | |||
Line 11: | Line 11: | ||
# Eppendorf tubes | # Eppendorf tubes | ||
# Agar plates containing the appropriate antibiotic | # Agar plates containing the appropriate antibiotic | ||
+ | # Water bath | ||
+ | # Centrifuge | ||
# SMM medium (1 liter) | # SMM medium (1 liter) | ||
#* 2.0 g of ammonium sulphate | #* 2.0 g of ammonium sulphate | ||
- | #* 14. | + | #* 14.0 g of dipotassium hydrogen phosphate |
- | #* 6. | + | #* 6.0 g of potassium dihydrogen phosphate |
- | #* 1. | + | #* 1.0 g of sodium citrate dehydrate |
- | #* 0. | + | #* 0.2 g of magnesium sulphate |
#* Top up the rest of the medium with water | #* Top up the rest of the medium with water | ||
# MM competence medium | # MM competence medium | ||
#* 10 ml of SMM medium | #* 10 ml of SMM medium | ||
#* 125 µl of Solution E (40% glucose) | #* 125 µl of Solution E (40% glucose) | ||
- | #* 100 µl of Tryptophane solution (at a concentration of | + | #* 100 µl of Tryptophane solution (at a concentration of 2 mg/ml) – |
#* 60 µl of Solution F (1M MgSO4) | #* 60 µl of Solution F (1M MgSO4) | ||
#* 10 µl of 20% Casamino acids | #* 10 µl of 20% Casamino acids | ||
Line 31: | Line 33: | ||
==Protocol== | ==Protocol== | ||
- | This protocol will stretch for 2 days. | + | This protocol will stretch for 2 days and aseptic technique have to be applied for all steps. |
===Protocol for Day 1=== | ===Protocol for Day 1=== | ||
# Inoculate a single colony of ''Bacillus subtilis'' 168 into a 15 ml falcon tube containing 10 ml of MM competence media. | # Inoculate a single colony of ''Bacillus subtilis'' 168 into a 15 ml falcon tube containing 10 ml of MM competence media. | ||
- | # For control transfer 10 ml of MM competence media without the bacteria. | + | # For control, transfer 10 ml of MM competence media without the bacteria. |
# Incubate overnight in a shaking incubator at 37ºC. | # Incubate overnight in a shaking incubator at 37ºC. | ||
===Protocol for Day 2=== | ===Protocol for Day 2=== | ||
- | |||
# Transfer 0.6 ml of the overnight culture into 50 ml falcon tube containing 10 ml of MM competence medium. | # Transfer 0.6 ml of the overnight culture into 50 ml falcon tube containing 10 ml of MM competence medium. | ||
# Incubate the tubes for 3 hours at 37ºC. | # Incubate the tubes for 3 hours at 37ºC. | ||
+ | # Warm up the starvation medium to 37ºC in a water bath. | ||
# Add 10 ml of starvation medium (prewarmed) into each tube and incubate for a further 1-2 hours at 37ºC. | # Add 10 ml of starvation medium (prewarmed) into each tube and incubate for a further 1-2 hours at 37ºC. | ||
- | # Transfer | + | # Transfer 0.4 ml of the medium not containing ''B. subtilis'' into one Eppendorf tube. |
#* Add 10 µl of water into the tube. | #* Add 10 µl of water into the tube. | ||
- | # Transfer | + | # Transfer 0.4 ml of the medium containing ''B. subtilis'' into two Eppendorf tubes. |
#* Add 10 µl of DNA into one tube. | #* Add 10 µl of DNA into one tube. | ||
#* Add 10 µl of water into one tube. | #* Add 10 µl of water into one tube. | ||
Line 54: | Line 56: | ||
# Resuspend the pellet in the remaining supernatant and plate it onto agar plates containing the appropriate antibiotic. | # Resuspend the pellet in the remaining supernatant and plate it onto agar plates containing the appropriate antibiotic. | ||
# Incubate the plates overnight at 37ºC. | # Incubate the plates overnight at 37ºC. | ||
+ | |||
'''Go back to our [[Team:Newcastle/Protocol list|Protocol List]]''' | '''Go back to our [[Team:Newcastle/Protocol list|Protocol List]]''' | ||
{{Team:Newcastle/footer}} | {{Team:Newcastle/footer}} |
Latest revision as of 14:22, 26 October 2010
|
Contents |
Transformation of Bacillus subtilis
Materials required
- Bacillus subtilis 168
- 10 µl of transformation DNA
- Pipettes
- 2X 15 ml falcon tubes
- 2X 50 ml falcon tubes
- Eppendorf tubes
- Agar plates containing the appropriate antibiotic
- Water bath
- Centrifuge
- SMM medium (1 liter)
- 2.0 g of ammonium sulphate
- 14.0 g of dipotassium hydrogen phosphate
- 6.0 g of potassium dihydrogen phosphate
- 1.0 g of sodium citrate dehydrate
- 0.2 g of magnesium sulphate
- Top up the rest of the medium with water
- MM competence medium
- 10 ml of SMM medium
- 125 µl of Solution E (40% glucose)
- 100 µl of Tryptophane solution (at a concentration of 2 mg/ml) –
- 60 µl of Solution F (1M MgSO4)
- 10 µl of 20% Casamino acids
- 5 µl of 0.22% Fe-NH4-citrate
- Starvation medium
- 10 ml of SMM medium
- 125 µl of Solution E (40% glucose)
- 60 µl of Solution F (1M MgSO4)
Protocol
This protocol will stretch for 2 days and aseptic technique have to be applied for all steps.
Protocol for Day 1
- Inoculate a single colony of Bacillus subtilis 168 into a 15 ml falcon tube containing 10 ml of MM competence media.
- For control, transfer 10 ml of MM competence media without the bacteria.
- Incubate overnight in a shaking incubator at 37ºC.
Protocol for Day 2
- Transfer 0.6 ml of the overnight culture into 50 ml falcon tube containing 10 ml of MM competence medium.
- Incubate the tubes for 3 hours at 37ºC.
- Warm up the starvation medium to 37ºC in a water bath.
- Add 10 ml of starvation medium (prewarmed) into each tube and incubate for a further 1-2 hours at 37ºC.
- Transfer 0.4 ml of the medium not containing B. subtilis into one Eppendorf tube.
- Add 10 µl of water into the tube.
- Transfer 0.4 ml of the medium containing B. subtilis into two Eppendorf tubes.
- Add 10 µl of DNA into one tube.
- Add 10 µl of water into one tube.
- Incubate the samples for 1 hour at 37ºC in the shaking incubator.
- The Eppendorf tubes have to be aerated, therefore incubate the tubes on their side.
- Centrifuge the Eppendorf tubes at 13,000 rpm for 2 minutes.
- Discard 0.3 ml of supernatant from each Eppendorf tubes.
- Resuspend the pellet in the remaining supernatant and plate it onto agar plates containing the appropriate antibiotic.
- Incubate the plates overnight at 37ºC.
Go back to our Protocol List