Team:Osaka/Notebook
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==Notebook== | ==Notebook== | ||
+ | |||
+ | ===October 1 (Fri)=== | ||
+ | # Gel electrophoresis (?) | ||
+ | # Ligations | ||
+ | #* 006: 004 as upstream, FcenA as downstream, 1-5A as vector | ||
+ | #* 007: 005 as upstream, FcenA as downstream, 1-5A as vector | ||
+ | #* 010: 004 as upstream, Fcex as downstream, 1-5A as vector | ||
+ | #* 011: 005 as upstream, Fcex as downstream, 1-5A as vector | ||
+ | #* 036: 032 as upstream, 033 as downstream, 1-5A as vector | ||
+ | #* 037: 004 as upstream, 024 as downstream, 1-1C as vector | ||
+ | #* 038: 005 as upstream, 024 as downstream, 1-1C as vector | ||
+ | # Transformation of ligation products | ||
+ | # PCR of ENO2 promoter, ADH2 promoter, SUC2 signal sequence | ||
+ | # Parts from NYU team: | ||
+ | {| | ||
+ | !ID!!Part Name!!Resistance!!Description | ||
+ | |- | ||
+ | |R1||<bbpart>BBa_K416003</bbpart>||A,K||yeast secretion tag | ||
+ | |- | ||
+ | |R2||<bbpart>BBa_K416004</bbpart>||A||Aga2 yeast cell surface display tag with linker | ||
+ | |} | ||
+ | # Miniprep of 026, 028, 030 | ||
+ | # Restriction digest | ||
+ | #* 026, 028 with XbaI, PstI | ||
+ | #* 030 with EcoRI, SpeI or EcoRI only | ||
+ | # Gel electrophoresis | ||
+ | # (RESULTS?) | ||
+ | # Transfer to solution culture: 021, 025, 026, 034, 036 | ||
+ | |||
+ | |||
+ | |||
+ | |||
+ | |||
===TO CHECK/CONFIRM=== | ===TO CHECK/CONFIRM=== | ||
* 'K1' (mentioned on 9/250 -> where did it come from? | * 'K1' (mentioned on 9/250 -> where did it come from? |
Revision as of 13:17, 13 October 2010
Calendar
July | |||||||
Week | S | M | T | W | T | F | S |
1 | 2 | 3 | |||||
4 | 5 | 6 | 7 | 8 | 9 | 10 | |
11 | 12 | 13 | 14 | 15 | 16 | 17 | |
18 | 19 | 20 | 21 | 22 | 23 | 24 | |
week1 | 25 | 26 | 27 | 28 | 29 | 30 | 31 |
August | |||||||
Week | S | M | T | W | T | F | S |
week2 | 1 | 2 | 3 | 4 | 5 | 6 | 7 |
week3 | 8 | 9 | 10 | 11 | 12 | 13 | 14 |
week4 | 15 | 16 | 17 | 18 | 19 | 20 | 21 |
week5 | 22 | 23 | 24 | 25 | 26 | 27 | 28 |
week6 | 29 | 30 | 31 | ||||
September | |||||||
Week | S | M | T | W | T | F | S |
week6 | 1 | 2 | 3 | 4 | |||
week7 | 5 | 6 | 7 | 8 | 9 | 10 | 11 |
week8 | 12 | 13 | 14 | 15 | 16 | 17 | 18 |
week9 | 19 | 20 | 21 | 22 | 23 | 24 | 25 |
week10 | 26 | 27 | 28 | 29 | 30 | ||
October | |||||||
Week | S | M | T | W | T | F | S |
week10 | 1 | 2 | |||||
week11 | 3 | 4 | 5 | 6 | 7 | 8 | 9 |
week12 | 10 | 11 | 12 | 13 | 14 | 15 | 16 |
week13 | 17 | 18 | 19 | 20 | 21 | 22 | 23 |
week14 | 24 | 25 | 26 | 27 | 28 | 29 | 30 |
week15 | 31 | ||||||
November | |||||||
Week | S | M | T | W | T | F | S |
week15 | 1 | 2 | 3 | 4 | 5 | 6 | |
7 | 8 | 9 | 10 | 11 | 12 | 13 | |
14 | 15 | 16 | 17 | 18 | 19 | 20 | |
21 | 22 | 23 | 24 | 25 | 26 | 27 | |
28 | 29 | 30 | |||||
Notebook
October 1 (Fri)
- Gel electrophoresis (?)
- Ligations
- 006: 004 as upstream, FcenA as downstream, 1-5A as vector
- 007: 005 as upstream, FcenA as downstream, 1-5A as vector
- 010: 004 as upstream, Fcex as downstream, 1-5A as vector
- 011: 005 as upstream, Fcex as downstream, 1-5A as vector
- 036: 032 as upstream, 033 as downstream, 1-5A as vector
- 037: 004 as upstream, 024 as downstream, 1-1C as vector
- 038: 005 as upstream, 024 as downstream, 1-1C as vector
- Transformation of ligation products
- PCR of ENO2 promoter, ADH2 promoter, SUC2 signal sequence
- Parts from NYU team:
ID | Part Name | Resistance | Description |
---|---|---|---|
R1 | <bbpart>BBa_K416003</bbpart> | A,K | yeast secretion tag |
R2 | <bbpart>BBa_K416004</bbpart> | A | Aga2 yeast cell surface display tag with linker |
- Miniprep of 026, 028, 030
- Restriction digest
- 026, 028 with XbaI, PstI
- 030 with EcoRI, SpeI or EcoRI only
- Gel electrophoresis
- (RESULTS?)
- Transfer to solution culture: 021, 025, 026, 034, 036
TO CHECK/CONFIRM
- 'K1' (mentioned on 9/250 -> where did it come from?
- 9/25 - miniprepped parts (inoculated 9/24) were plasmids from karita sensei? biobrick parts pcr-cloned on 9/23? why where these parts transformed immediately after miniprep?
- 'CelB, Cel44A' etc vs 'Cel5, Cel8, Cel44' which nomenclature refers to what (received plasmids, pcr product?)