Team:UT-Tokyo/Sudoku notebook 2

From 2010.igem.org

(Difference between revisions)
(Make construct)
(Make construct)
Line 46: Line 46:
-
==== 7/2 ====
+
==== 8/4 ====
'''Miniprep'''
'''Miniprep'''
-
2-3, 11 plasmid (7/1 inoculation)
+
12-Ⅰ 58.7ng/uL
 +
12-Ⅱ 55.9ng/uL
 +
13ーⅠ 48.7ng/uL
 +
13ーⅡ 48.5ng/uL
-
2-3 → 105 ng/uL
+
'''Inoculation'''
-
11 (1st) → 191.3 ng/uL
+
sudoku 12-Ⅰ&12-Ⅱ
 +
sudoku 13-Ⅰ&13-Ⅱ
 +
(8/3 Transformation)
-
11 (2nd) → 49.5 ng/uL
+
'''Enzyme digestion'''
 +
i  1-99234Ⅰ EScut (7/24 Miniprep & Sequencing)
 +
ii  1-9234Ⅰ EScut (7/21 Miniprep / 7/24 Sequencing)
 +
iii 1,5,11,7,8,4Ⅱ EXcut (7/29 Miniprep) 
-
'''Enzyme cut'''
+
'''Ligation'''
-
2-3, 11 plasmid (7/2 miniprep)
+
i-iii i:6ul iii:6ul ligationmix 12ul
 +
ii-iii ii:6ul iii:4ul ligationmix 10ul
-
2-3 : 9.5 uL / H / ES (1.5 uL)
+
'''Gel extract'''
-
 
+
-
11 (1st) : 5.2 uL / H /  ES (1.5 uL) → Judged failure by cut check → miniprep again
+
-
 
+
-
11 (2nd) : 20.2 uL / H /  ES (1.5 uL)
+
 +
i 1-99234  8.8ng/uL
 +
ii 1-9234  7.1ng/uL
 +
iii 1-5-11-7-8-4  18.0ng/uL

Revision as of 01:56, 19 September 2010

Sudoku

Abstract Construct Experiment Notebook Result

Notebook

Pre-experiment

AUGUST!!!!!


AUGUST!!!!!



AUGUST!!!!! AUGUST!!!!!



AUGUST!!!!!

Make construct

8/2

Sequencing

sequel to 7/31

add HiDi 20μL

A6 I pre, B6 I sur,C6 II pre

D6 II sur, E6 III pre, F6 III sur


8/4

Miniprep

12-Ⅰ 58.7ng/uL 12-Ⅱ 55.9ng/uL 13ーⅠ 48.7ng/uL 13ーⅡ 48.5ng/uL

Inoculation

sudoku 12-Ⅰ&12-Ⅱ sudoku 13-Ⅰ&13-Ⅱ (8/3 Transformation)

Enzyme digestion

i 1-99234Ⅰ EScut (7/24 Miniprep & Sequencing) ii 1-9234Ⅰ EScut (7/21 Miniprep / 7/24 Sequencing) iii 1,5,11,7,8,4Ⅱ EXcut (7/29 Miniprep) 

Ligation

i-iii i:6ul iii:6ul ligationmix 12ul ii-iii ii:6ul iii:4ul ligationmix 10ul

Gel extract

i 1-99234 8.8ng/uL ii 1-9234 7.1ng/uL iii 1-5-11-7-8-4 18.0ng/uL


7/3

Gel extract

2-3, 11 plasmid (7/2 enzyme cut)

Label : 100703 X ゲル抽出


7/5

Ligation

2-3 (7/3 enzyme cut) & 4 / 11 (7/3 enzyme cut) & 7

2-3 : 37.5 ng/uL → 5 uL & 4 : 5.2 ng/uL → 5 uL

11 : 4.2 ng/uL → 7.5 uL & 7 : Unknown → 2.5 uL


Transformation

2-3-4 plasmid (7/5 ligation) / 11-7 plasmid (7/5 ligation)

Check test

Main construct

Research of SP6 RNApol cDNA and F plasmid

Convert lox71(rev) to lox66(rev)

Make Hin(rev)

Revise MS2 gene

Make location(rev)-rbs(rev)-location(rev)

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