Team:UT-Tokyo/Sudoku notebook 2

From 2010.igem.org

(Difference between revisions)
(New page: {{UT-Tokyo_HEADER}} <div id="main_all"> = '''Sudoku''' = [https://2010.igem.org/Team:UT-Tokyo/Sudoku_abstract Abstract] [https://2010.igem.org/Team:UT-Tokyo/Sudoku_construct Constru...)
(Make construct)
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=== Make construct ===
=== Make construct ===
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'''Transformation'''
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'''Sequencing'''
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2-3 plasmid (6/30 ligation)
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< 6/30 transformation → fail >
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'''Inoculation'''
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11 plasmid (6/30 thaw, transformation)
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'''Enzyme cut'''
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2, 3, 5, 7 plasmid (6/25 miniprep)
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2 : 53.9 ng/uL → about 15 uL (shortage) / H / SP (2 uL)
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3 : 124.2 ng/uL → 8 uL / M / XP (2 uL)
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5 : 81.3 ng/uL → 12.3 uL / H / SP (2 uL)
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7 : 85.4 ng/uL → 11.7 uL / H / SP (2 uL)
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'''Gel extract'''
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2, 3, 5, 7 plasmid (7/1 enzyme cut)
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Label : 100701 数X (2,3,5,9) ゲル抽出
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sequel to 7/31
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add HiDi 20μL
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A6 I pre, B6 I sur,C6 II pre
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D6 II sur, E6 III pre, F6 III sur
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2-3-4 plasmid (7/5 ligation) / 11-7 plasmid (7/5 ligation)
2-3-4 plasmid (7/5 ligation) / 11-7 plasmid (7/5 ligation)
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=== Check test ===
=== Check test ===

Revision as of 01:40, 19 September 2010

Sudoku

Abstract Construct Experiment Notebook Result

Notebook

Pre-experiment

AUGUST!!!!!


AUGUST!!!!!



AUGUST!!!!! AUGUST!!!!!



AUGUST!!!!!

Make construct

8/2

Sequencing

sequel to 7/31 add HiDi 20μL A6 I pre, B6 I sur,C6 II pre D6 II sur, E6 III pre, F6 III sur


7/2

Miniprep

2-3, 11 plasmid (7/1 inoculation)

2-3 → 105 ng/uL

11 (1st) → 191.3 ng/uL

11 (2nd) → 49.5 ng/uL


Enzyme cut

2-3, 11 plasmid (7/2 miniprep)

2-3 : 9.5 uL / H / ES (1.5 uL)

11 (1st) : 5.2 uL / H / ES (1.5 uL) → Judged failure by cut check → miniprep again

11 (2nd) : 20.2 uL / H / ES (1.5 uL)


7/3

Gel extract

2-3, 11 plasmid (7/2 enzyme cut)

Label : 100703 X ゲル抽出


7/5

Ligation

2-3 (7/3 enzyme cut) & 4 / 11 (7/3 enzyme cut) & 7

2-3 : 37.5 ng/uL → 5 uL & 4 : 5.2 ng/uL → 5 uL

11 : 4.2 ng/uL → 7.5 uL & 7 : Unknown → 2.5 uL


Transformation

2-3-4 plasmid (7/5 ligation) / 11-7 plasmid (7/5 ligation)

Check test

Main construct

Research of SP6 RNApol cDNA and F plasmid

Convert lox71(rev) to lox66(rev)

Make Hin(rev)

Revise MS2 gene

Make location(rev)-rbs(rev)-location(rev)

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