Team:Mexico-UNAM-CINVESTAV/Notebook/Week One

From 2010.igem.org

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__NOTOC__
__NOTOC__
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'''As summer project our experimental work begin in August. After intensive brain-storming we finnaly decide between two options.'''
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'''As summer project our experimental work began in August. After intensive brainstorming we finnaly decide'''
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'''* Inmunoresponse using Synthetic Biology
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'''between two options.'''
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  '''* Criobiology applied to plant crops
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  *''Inmunoresponse using Synthetic Biology''
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= '''After a selection process we are going to choose the Criobiology Project''' =
+
*''Criobiology applied to plant crops''
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'''The final design of our expresions moduls for the project were as follow.'''
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= '''After a selection process we chose the Criobiology Project''' =
 +
 
 +
'''The final design of our expresions moduls is as follow.'''
[[Image:Primers(2).JPG |center|500px||border|caption]]
[[Image:Primers(2).JPG |center|500px||border|caption]]
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'''Next Notebook paper is our reference for primers using, ligations and moduls Assembly.'''
+
'''Next Notebook paper is our reference for primer's use, ligations and moduls Assembly.'''
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==''Monday''==
==''Monday''==
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==='''After discution we conclude the Igem’s vector (vial with green cover) is not enough.'''===
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==='''We discussed and concluded the Igem’s vector (vial with green cover) is not enough.'''===
-
==='''First step transform only the vector to get enough and begin ligations.'''===
+
==='''First step transform only vector to get enough and begin ligations.'''===
==='''We are going to  transform Psb1C3  from plate.  For this:'''===
==='''We are going to  transform Psb1C3  from plate.  For this:'''===
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*'''Prepare a stock of Cloramphenicol, Kanamicyn, Ampicilin solutions.'''
*'''Prepare a stock of Cloramphenicol, Kanamicyn, Ampicilin solutions.'''
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*''' Make LB agar plates. '''
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*''' 10 LB agar and 35ug/ml cloramphenicol plates made up . '''
*'''Complete procedure for making quimio and electro-competent cells.'''
*'''Complete procedure for making quimio and electro-competent cells.'''
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==''Tuesday''==
==''Tuesday''==
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==='''Completed competent cells stored aliquots at -80 degrees each vial with 150μl.'''===
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==='''Completed competent cells and stored aliquots at -80 degrees each vial with 150μl.'''===
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==='''We transformed TOP10 cells with Psb1C3.'''===
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==='''We transformed DH5α cells with Psb1C3.'''===
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*'''Planned and prepared for tomorrow's transformation'''
 
==''Wednesday''==
==''Wednesday''==
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==='''For a strange razon we have not transformats cells'''===  
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==='''For a strange reason we have not transformats cells'''===  
==='''today we are going to check out the Cloramphenicol'''===  
==='''today we are going to check out the Cloramphenicol'''===  
==='''dose and try again the transformation with Psb1C3.'''===
==='''dose and try again the transformation with Psb1C3.'''===
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[[Image:PCR.gif]]
[[Image:PCR.gif]]
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==='''The amplification is correct and we have to look for a nanodrop'''===  
+
==='''The amplification is correct and we have to looking for a nanodrop'''===  
==='''to quantify DNA’s concentrations.'''===
==='''to quantify DNA’s concentrations.'''===

Revision as of 16:37, 26 October 2010



As summer project our experimental work began in August. After intensive brainstorming we finnaly decide

between two options.

*Inmunoresponse using Synthetic Biology
*Criobiology applied to plant crops

After a selection process we chose the Criobiology Project

The final design of our expresions moduls is as follow.

caption


Next Notebook paper is our reference for primer's use, ligations and moduls Assembly.


Primers1.JPG

The AFP (Antifreeze protein) was synthesized as below

Vector001.jpg


Week #1

06th September - 10th September 2010

Monday

We discussed and concluded the Igem’s vector (vial with green cover) is not enough.

First step transform only vector to get enough and begin ligations.

We are going to transform Psb1C3 from plate. For this:

  • Prepare a stock of Cloramphenicol, Kanamicyn, Ampicilin solutions.
  • 10 LB agar and 35ug/ml cloramphenicol plates made up .
  • Complete procedure for making quimio and electro-competent cells.


Tuesday

Completed competent cells and stored aliquots at -80 degrees each vial with 150μl.

We transformed DH5α cells with Psb1C3.

Wednesday

For a strange reason we have not transformats cells

today we are going to check out the Cloramphenicol

dose and try again the transformation with Psb1C3.

Thursday

In vector’s absence we have recived the primer’s synthesis

and proceed to amplify by PCR.

PCR.gif

The amplification is correct and we have to looking for a nanodrop

to quantify DNA’s concentrations.