Team:Mexico-UNAM-CINVESTAV/Notebook/Week One

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{{Mexico-UNAM-CINVESTAV-HEADER}}
{{Mexico-UNAM-CINVESTAV-HEADER}}
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semana 1 trabajo, prueba
 
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__NOTOC__
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'''As summer proyect our experimental work began at agust after intensive brian storming finaly deccided between two options.'''
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'''As summer project our experimental work began in August, after intensive brainstorming we finnaly decide
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'''* Inmunoresponse using Syintetic biology and
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'''between two options.
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'''* Cryobiology applied to plant tissues.
 
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= '''After selection proces we going to go  with a Cryobiology Proyect''' =
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=*'''Inmunoresponse using Synthetic Biology.'''=
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'''The final design our expresion’s moduls for  the poryect were as follow.'''
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=*'''Cryobiology applied to plant crops.'''=
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== '''After a selection process we chose the Cryobiology Project.''' ==
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'''The final design of the expressions modules were as follow:'''
[[Image:Primers(2).JPG |center|500px||border|caption]]
[[Image:Primers(2).JPG |center|500px||border|caption]]
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'''Next Notebook paper is our reference for primers using, ligations and moduls Assambly.'''
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'''Next Notebook sheet is our reference for primers and ligations and for modules Assembly:'''
[[Image:Primers1.JPG |center|500px|]]
[[Image:Primers1.JPG |center|500px|]]
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'''The AFP (Anty freeze protein)  was synthesized as below'''
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'''The AFP (Antifreeze Protein)  was synthesized as follow:'''
[[Image:Vector001.jpg|center|500px|]]
[[Image:Vector001.jpg|center|500px|]]
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= Week #1 =
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= Week 1  06th  September - 10th 2010 =
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= 06th  September - 10th September 2010 =
==''Monday''==
==''Monday''==
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==='''After discution we conclude the Igem’s vector (vial with green cover) is not enough.'''===
 
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==='''First step transform only the vector to get  enough and begin ligations.'''===
 
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==='''We going to  transform Psb1C3  from plate.  For this:'''===
 
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*'''Prepare a stock of Cloramphenicol, Kanamicyn, Ampicilin solutions.'''
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*''' We got plasmid PSB1C3 from the Biobrick plate. '''
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*''' Make LB agar plates. '''
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*''' We prepared stock solutions of Cloramphenicol, Kanamicyn, Ampicilin.'''
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*'''Complete procedure for making quimio and electro competent cels.'''
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*''' Some LB agar and 35ug/ml cloramphenicol plates made up . '''
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*''' We al ready made quimio and electro-competent cells for transformation and stored in aliquots in containers vials at -80 degrees..'''
==''Tuesday''==
==''Tuesday''==
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==='''Completed competent cells stored aliquots at -80 degrees each vial with 150μl.'''===
 
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==='''We transformed TOP10 cells with Psb1C3.'''===
 
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*'''Planned and prepared for tomorrow's transformation'''
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==='''We transformed DH5α cells with PSB1C3.'''===
==''Wednesday''==
==''Wednesday''==
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==='''For a strange razon we have not transformats cells'''===
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'''We have not obtained  transformats cells.'''
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==='''today we going to check out the Cloramphenicol'''===
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==='''dose and try again the transformation with Psb1C3.'''===
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'''We checked out Cloramphenicol stock concentration and attempt again the transformation used PSB1C3.'''
==''Thursday''==
==''Thursday''==
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==='''In vector’s absence we have recived the primer’s sintesis'''===
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'''The primers arrived and we proceed to amplify the modules by PCR.'''
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==='''and proceed to amplify by PCR.'''===
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[[Image:PCR.gif]]
[[Image:PCR.gif]]
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==='''The amplification is correct and we have to looking for a nanodrop'''===
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'''The amplification was ok and we had looking for a nano spectrophotometer.'''
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==='''to quantify DNA’s concentrations.'''===
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'''we made quantification of DNA concentrations'''

Latest revision as of 19:55, 27 October 2010



As summer project our experimental work began in August, after intensive brainstorming we finnaly decide

between two options.


*Inmunoresponse using Synthetic Biology.

*Cryobiology applied to plant crops.

After a selection process we chose the Cryobiology Project.

The final design of the expressions modules were as follow:

caption


Next Notebook sheet is our reference for primers and ligations and for modules Assembly:


Primers1.JPG

The AFP (Antifreeze Protein) was synthesized as follow:

Vector001.jpg

Week #1

06th September - 10th September 2010

Monday

  • We got plasmid PSB1C3 from the Biobrick plate.
  • We prepared stock solutions of Cloramphenicol, Kanamicyn, Ampicilin.
  • Some LB agar and 35ug/ml cloramphenicol plates made up .
  • We al ready made quimio and electro-competent cells for transformation and stored in aliquots in containers vials at -80 degrees..

Tuesday

We transformed DH5α cells with PSB1C3.

Wednesday

We have not obtained transformats cells.

We checked out Cloramphenicol stock concentration and attempt again the transformation used PSB1C3.

Thursday

The primers arrived and we proceed to amplify the modules by PCR.

PCR.gif

The amplification was ok and we had looking for a nano spectrophotometer.

we made quantification of DNA concentrations