Team:Imperial College London/Research

From 2010.igem.org

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''An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae''. Havarstein, Coomaraswamy & Morrison, 1995
''An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae''. Havarstein, Coomaraswamy & Morrison, 1995
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We were really concerned that the system might not be sensitive. However, we learnt about threshold levels of the AIP from reading this paper and it reassured us that only a very small concentration (10ng/ml) of CSP-1 is needed to produce a response. Phew!
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We were really concerned that the system might not be sensitive enough. However, we learnt about threshold levels of the AIP from reading this paper and it reassured us that only a very small concentration (10ng/ml) of CSP-1 is needed to produce a response. Phew!
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Revision as of 11:42, 24 October 2010

Research
A large amount of background reading went into designing our project. Here we each present some of the research papers that we found the most interesting, and what they are all about.
Ben
Kyasha
Maddie
Kirill
Wolf
Anita
Piotr
Nick
Harriet
The neglected tropical diseases: The ancient afflictions of stigma and poverty and the prospects for their integrated control and elimination., Hotez et al, 2006.

This paper explains why NTDs are so in need of research and the problems they create in developing countries. Reading this made us want to raise awareness of NTDs and promote research into their diagnosis, treatment and environmental control. The authors also state that reducing the NTD burden would impact on seven of the eight Millennium Development Goals (MDGs) set by the UN. I found the section on Integrated Control particularly interesting, as this is an area in which our detection kit could be applied.


Diffusion of synthetic biology: a challenge to biosafety Systems and Synthetic Biology. Schmidt, 2008 This is a great read if you're interested in the regulation of synthetic biology. I also found it really inspiring as it looks towards the future of the field, but still keeps a sense of realism in terms of biosaftey measures and the accessibility of synthetic biology.


An unmodified heptadecapeptide pheromone induces competence for genetic transformation in Streptococcus pneumoniae. Havarstein, Coomaraswamy & Morrison, 1995

We were really concerned that the system might not be sensitive enough. However, we learnt about threshold levels of the AIP from reading this paper and it reassured us that only a very small concentration (10ng/ml) of CSP-1 is needed to produce a response. Phew!

Florian

Accumulation of a Recombinant Aspergillus oryzae Lipase Artificially Localized on the Bacillus subtilis Cell Surface., Kobayashi et al., 2000

cutL cDNA encoding a extracellular lipase, L1, from Aspergillus orzyae, was ligated to the cell wall binding domain (CWB) of the major autolysin LytC of B. subtilis. Expression and functionality of the recombinant protein CWB-Cut-L was tested using SDS-PAGE and zymography, showing that catalytic activity of L1 was maintained.

This paper was of fundamental importance for our detection module as it laid out nicely the possibility of anchoring peptides on the bacterial cell surface whilst maintaining the functionality. This proved to be precisely what we needed, allowing also for easy testing, as the major autolysin LytC used in this paper, is bind to the cell wall non-covalently and can thus be washed of the cell wall easily using high salt concentrations.


Human schistosomiasis, Gryseels et al., 2006

Schistosomiasis is a tropical disease caused by the water-borne schistosoma parasitehas infected over 200 milion people world wide. The disease is a cause of morbidity and can give rise to a number of complications in liver, intestines and urinary system. These are the result of complex immunological interactions with the parasite eggs in the human tissues. Furthermore diagnosis, treatment and prophylaxis are discussed.

This excellent review was most helpful in getting a broad overview of the parasitic life cycle, the disease schsitosomiasis as well as the conditions it can provoke in our body, without lacking detail on these parts. The article rounded up this summary with a great introduction into the treatment, diagnosis and approaches to the development of a vaccination, making it essential in for our wiki page on the parasite and schistosomiasis.