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Team:Freiburg Bioware/Modelling
From 2010.igem.org
(Difference between revisions)
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</ul> | </ul> | ||
For the first two models we assumed reactions according to the law of mass action to create an ordinary differential equation (ODE) model. | For the first two models we assumed reactions according to the law of mass action to create an ordinary differential equation (ODE) model. | ||
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<h2>Model for Virus Production</h2> | <h2>Model for Virus Production</h2> | ||
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<h3>Reaction Scheme</h3> | <h3>Reaction Scheme</h3> | ||
<center> | <center> | ||
<img width="733" height="966" src="https://static.igem.org/mediawiki/2010/b/b8/Freiburg10_VirusProduction01.png" alt="Reaction scheme for the virus production" /> | <img width="733" height="966" src="https://static.igem.org/mediawiki/2010/b/b8/Freiburg10_VirusProduction01.png" alt="Reaction scheme for the virus production" /> | ||
</center> | </center> | ||
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<h3>Reduced Reaction Scheme</h3> | <h3>Reduced Reaction Scheme</h3> | ||
<center> | <center> | ||
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<img width="733" height="643" src="https://static.igem.org/mediawiki/2010/6/68/Freiburg10_VirusProduction02.png" alt="reduced reaction scheme for the virus production" /> | <img width="733" height="643" src="https://static.igem.org/mediawiki/2010/6/68/Freiburg10_VirusProduction02.png" alt="reduced reaction scheme for the virus production" /> | ||
</center> | </center> | ||
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<h3>Differential Equations</h3> | <h3>Differential Equations</h3> | ||
<center> | <center> | ||
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</center> | </center> | ||
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<h2>Model for Virus Infection</h2> | <h2>Model for Virus Infection</h2> | ||
| - | + | <br><br> | |
<h3>Reaction Scheme</h3> | <h3>Reaction Scheme</h3> | ||
<center> | <center> | ||
<img width="359" height="335" src="https://static.igem.org/mediawiki/2010/9/90/Freiburg10_VirusInfection01.png" alt="Reaction scheme for the virus production" /> | <img width="359" height="335" src="https://static.igem.org/mediawiki/2010/9/90/Freiburg10_VirusInfection01.png" alt="Reaction scheme for the virus production" /> | ||
</center> | </center> | ||
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<h3>Reduced Reaction Scheme</h3> | <h3>Reduced Reaction Scheme</h3> | ||
<center> | <center> | ||
<img width="359" height="227" src="https://static.igem.org/mediawiki/2010/8/83/Freiburg10_VirusInfection02.png" alt="Reaction scheme for the virus production" /> | <img width="359" height="227" src="https://static.igem.org/mediawiki/2010/8/83/Freiburg10_VirusInfection02.png" alt="Reaction scheme for the virus production" /> | ||
</center> | </center> | ||
| + | <br><br> | ||
<center> | <center> | ||
<img width="429" height="134" src="https://static.igem.org/mediawiki/2010/3/3f/Freiburg10_VirusInfection03.png" alt="Reaction scheme for the virus production" /> | <img width="429" height="134" src="https://static.igem.org/mediawiki/2010/3/3f/Freiburg10_VirusInfection03.png" alt="Reaction scheme for the virus production" /> | ||
</center> | </center> | ||
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<h3>Differential Equations</h3> | <h3>Differential Equations</h3> | ||
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<img width="655" height="314" src="https://static.igem.org/mediawiki/2010/8/85/Freiburg10_VirusInfection04.png" alt="Reaction scheme for the virus production" /> | <img width="655" height="314" src="https://static.igem.org/mediawiki/2010/8/85/Freiburg10_VirusInfection04.png" alt="Reaction scheme for the virus production" /> | ||
</center> | </center> | ||
| - | + | <br><br> | |
<center> | <center> | ||
<img width="800" height="285" src="https://static.igem.org/mediawiki/2010/8/84/Freiburg10_VirusInfection05.png" alt="Reaction scheme for the virus production" /> | <img width="800" height="285" src="https://static.igem.org/mediawiki/2010/8/84/Freiburg10_VirusInfection05.png" alt="Reaction scheme for the virus production" /> | ||
Revision as of 15:06, 21 October 2010
Modeling
For the modeling part we considered the three main parts:- The virus production
- the infection of a target cell
- the therapy
Model for Virus Production
Reaction Scheme
Reduced Reaction Scheme
Differential Equations
Model for Virus Infection
Reaction Scheme
Reduced Reaction Scheme
Differential Equations
