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From 2010.igem.org

Contents 1 BSim Demonstration: Outline 2 Generating an Octree 3 Simple Diffusion 4 Motility in a Gel Matrix 4.1 Tracking Movement

BSim Demonstration: Outline

• Generating an Octree
• Simple diffusion
• Motility in a Gel Matrix
• Tracking Movement

Generating an Octree

We have demonstrated some of the new features of BSim by modeling the interaction of agrEcoli with their bead's gel matrix.

Simple Diffusion

Motility in a Gel Matrix

Tracking Movement