Team:Freiburg Bioware/NoteBook/Labjournal/September2

From 2010.igem.org

(Difference between revisions)
(124. labday 19.09.2010)
(Continuation with Colony-PCR of pSB1C3_CD and ViralBrick motif Z34C)
Line 145: Line 145:
<b>Loading plan:</b>
<b>Loading plan:</b>
<br/>
<br/>
-
upper lanes
+
<b>upper lanes</b>
  M  CD1  CD2  CD3  CD4  CD5  CD6  CD7  CD8  CD9  CD10  +ctrl(CFP) +ctrl(BAP) -ctrl(pAAV_MCS)  11Q1  12Q1  13Q1 13Q2  M
  M  CD1  CD2  CD3  CD4  CD5  CD6  CD7  CD8  CD9  CD10  +ctrl(CFP) +ctrl(BAP) -ctrl(pAAV_MCS)  11Q1  12Q1  13Q1 13Q2  M
-
lower lanes
+
<b>lower lanes</b>
  M  11T41  11T42  11T43  11T44    12T41  12T42  12T43  12T44    13T41  13T42  13T43  13T44    14T41  14T42 14T43  14T44  M
  M  11T41  11T42  11T43  11T44    12T41  12T42  12T43  12T44    13T41  13T42  13T43  13T44    14T41  14T42 14T43  14T44  M
 +
 +
<br/>
 +
<b>Expected sizes of the PCR products are:</b>
 +
<ul>
 +
<li>Cytosine deaminase (CD) = 1300bp</li>
 +
<li>Z34C loops insertion motif = 220bp</li>
 +
<li>Positive control 1 = CFP = 750bp</li>
 +
<li>Positive control 2 = BAP_587 = 170bp</li>
 +
</ul>
 +
<br />
 +
<b>Results</b>
 +
 +

Revision as of 11:32, 19 September 2010

September

124. labday 19.09.2010

Continuation with Colony-PCR of pSB1C3_CD and ViralBrick motif Z34C

Investigator: Bea

Comment: Since the colony PCR of the last try did not work exactly the way we expected it, another colony PCR approach with new primers was conducted.


Loading plan:
upper lanes

M   CD1  CD2  CD3  CD4  CD5  CD6  CD7  CD8  CD9  CD10   +ctrl(CFP) +ctrl(BAP) -ctrl(pAAV_MCS)   11Q1  12Q1  13Q1 13Q2  M

lower lanes

M   11T41  11T42  11T43  11T44    12T41  12T42  12T43  12T44    13T41  13T42  13T43  13T44    14T41  14T42 14T43  14T44  M


Expected sizes of the PCR products are:

  • Cytosine deaminase (CD) = 1300bp
  • Z34C loops insertion motif = 220bp
  • Positive control 1 = CFP = 750bp
  • Positive control 2 = BAP_587 = 170bp


Results