Team:UT-Tokyo/Sudoku notebook 2

From 2010.igem.org

(Difference between revisions)
(Make construct)
(Make construct)
Line 150: Line 150:
'''Cutcheck'''
'''Cutcheck'''
-
XScut 0-iii (8/9 ligation)
+
XScut 0-iii, I, II (8/9 ligation)
-
0-iii I,II
+
-> failure
Line 160: Line 160:
-
''''''
+
==== 8/11 ====
-
''''''
+
 
Line 167: Line 167:
-
==== 7/5 ====
 
==== 7/5 ====
==== 7/5 ====

Revision as of 02:53, 19 September 2010

Sudoku

Abstract Construct Experiment Notebook Result

Notebook

Pre-experiment

AUGUST!!!!!


AUGUST!!!!!



AUGUST!!!!! AUGUST!!!!!



AUGUST!!!!!

Make construct

8/4

Inoculation

sudoku 12-I & 12-II

sudoku 13-I & 13-II

(8/3 Transformation)


Enzyme digestion

i 1-99234Ⅰ EScut (7/24 Miniprep & Sequencing)

ii 1-9234Ⅰ EScut (7/21 Miniprep / 7/24 Sequencing)

iii 1,5,11,7,8,4Ⅱ EXcut (7/29 Miniprep) 


Gel extract

i 1-99234 8.8ng/uL

ii 1-9234 7.1ng/uL

iii 1-5-11-7-8-4 18.0ng/uL


Ligation

i-iii i:6uL iii:6uL ligationmix 12uL

ii-iii ii:6uL iii:4uL ligationmix 10uL

(8/4 Miniprep)


Miniprep

12-i 58.7ng/uL

12-ii 55.9ng/uL

13-i 48.7ng/uL

13-ii 48.5ng/uL

(8/4 Inoculation)


8/5

Enzyme digestion

1234(107.2ng/uL)(8/4 gel extract)


Gel extract

sudoku (1234) 6.6ng/uL


Ligation

0(1234)&iii


Transformation

i-iii & ii-iii

0(1234)-iii

(8/4 & 8/5)


8/6

Inoculation

0-iii,(i-iii),ii-iii (8/5 transformation)


transformation

i-iii (8/4 ligation)


8/9

Enzyme digestion

0 107.2ng/uL (7/10 Miniprep)

iii 100.7ng/uL (7/29 Miniprep ii)


Gel extract

0 & iii 56.6ng/uL

(8/9 Enzyme digestion)


Sequencing

iii-II (7/29 Miniprep)


8/10

Cutcheck

XScut 0-iii, I, II (8/9 ligation)

-> failure


transformation

0-iii (8/9 ligation)


8/11

7/5

Ligation

2-3 (7/3 enzyme cut) & 4 / 11 (7/3 enzyme cut) & 7

2-3 : 37.5 ng/uL → 5 uL & 4 : 5.2 ng/uL → 5 uL

11 : 4.2 ng/uL → 7.5 uL & 7 : Unknown → 2.5 uL


Transformation

2-3-4 plasmid (7/5 ligation) / 11-7 plasmid (7/5 ligation)

Check test

Main construct

Research of SP6 RNApol cDNA and F plasmid

Convert lox71(rev) to lox66(rev)

Make Hin(rev)

Revise MS2 gene

Make location(rev)-rbs(rev)-location(rev)

Copyright © 2010 iGEM UT-Tokyo. All rights reserved.