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Team:TU Delft/Modeling
From 2010.igem.org
Contents |
In Silico
Seeing as our team consists of a number of members who know their way around computers, quite some in silico work has been perfomed. More information on these projects can be found here.
Modeling
introduction to modeling Some stuff about what we modeled and why
Metabolic Flux Analysis
A metabolic flux analysis is an analysis to calculate the theoretical maximal yields for a proposed system of pathways in a micro-organism. With this analysis it is also possible to find whether a system is not viable because of a co-factor imbalance. Lastly, several product pathways were introduced to E. coli with hydrocarbon degradation to see what maximal theoretical yields on hydrocarbons are.
Find out more here
Hydrocarbon regulated expression system
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Find out more here
Interaction mapping
To give some clues about how our biobricks are working in their new E. coli proteome, an application has been developed that maps interactions from the native proteomes to the E. coli proteome. More info here
Wiki Tips & Tricks
As you might have noticed, we had some fun designing our wiki, want to know how we did it? You can find out here
