Team:KAIST-Korea/Project/Methods/PCR Result

From 2010.igem.org

Revision as of 17:14, 12 September 2010 by Imb10 (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

PCR Experiment

9/6 ~ 9/9 PCR Result

PCR composition

Materials	Amount
Template	100pmole
Primer A	50pmole
Primer B	50pmole
dNTP (dNTP mixture 2.5mM TaKaRa)	2ul
Taq (Pfu Turbo® DNA Polymerase 2.5U/ μl STRATAGENE)	0.25ul
10x buffer (10x cloned Pfu Reaction buffer)	5ul
DW (3rd sterile water)	rest
Total	50ul

Exp 1

Segment

Annealing Temperature

Result

a	STAT1	53*C	-	-
b	V_STAT1	53*C	-	-
c	Fusion Antibody receptor	53*C	-	-
d	Signal peptide	56*C	-	-
e	Ig-like	56*C	-	-
f	Signal Peptide + Ig-like	56*C	-	-
g	Antibody	56*C	-	-
h	V_Fusion Antibody Receptor	53*C	-	-
i	B_FGFR1	56*C	-	-
j	VB_FGFR1	56*C	-	-

Exp 2

Segment

Annealing Temperature

Result

a	STAT1	48*C	60%	2139bp
b	V_STAT1	48*C	-	-

Exp 3

Segment

Annealing Temperature

Result

a	STAT1	50*C	100%	2139bp
b	V_STAT1	50*C	-	-

Exp 4

Segment

Annealing Temperature

Result

a	Fusion Antibody receptor	50*C	-	-
b	Signal peptide	50*C	-	-
c	Ig-like	50*C	60%	339bp
d	Signal Peptide + Ig-like	50*C	-	-
e	Antibody	50*C	-	-
f	V_Fusion Antibody Receptor	50*C	-	-

9/10 ~ 9/12 PCR Result

PCR composition

Materials	Amount
Template	150pmole
Primer A	50pmole
Primer B	50pmole
dNTP (dNTP mixture 2.5mM TaKaRa)	5ul
Taq (Pfu Turbo® DNA Polymerase 2.5U/ μl STRATAGENE)	0.25ul
10x buffer (10x cloned Pfu Reaction buffer)	5ul
DW (3rd sterile water)	rest
Total	50ul

Exp 1

Segment

Annealing Temperature

Result

a	STAT1	60*C	-	-
b	V_STAT1	60*C	-	-
c	Fusion Antibody receptor	60*C	70%	1095bp
d	Signal peptide	60*C	-	-
e	Ig-like	60*C	60%	339bp
f	Signal Peptide + Ig-like	60*C	-	-
g	Antibody	60*C	100%	669bp
h	V_Fusion Antibody Receptor	60*C	-	-
i	B_FGFR1	60*C	-	-
j	VB_FGFR1	60*C	-	-
x1	negative 1	60*C	-	-
x2	negative 2	60*C	-	-

Exp 2

Segment

Annealing Temperature

Result

a	STAT1	58*C	60%	2139bp
b	V_STAT1	58*C	-	-
c	Fusion Antibody receptor	58*C	80%	1095bp
d	Signal peptide	58*C	80%	87bp
e	Ig-like	58*C	100%	339bp
f	Signal Peptide + Ig-like	58*C	80%	426bp
g	Antibody	58*C	100%	669bp
h	V_Fusion Antibody Receptor	58*C	-	-
i	B_FGFR1	58*C	-	-
j	VB_FGFR1	58*C	-	-
x	negative	58*C	-	-

Exp 3

Segment

Annealing Temperature

Result

a	STAT1	62*C	-	-
b	V_STAT1	62*C	-	-
c	Fusion Antibody receptor	62*C	10%	1095bp
d	Signal peptide	62*C	-	-
e	Ig-like	62*C	-	-
f	Signal Peptide + Ig-like	62*C	-	-
g	Antibody	62*C	-	-
h	V_Fusion Antibody Receptor	62*C	-	-
i	B_FGFR1	62*C	-	-
j	VB_FGFR1	62*C	-	-
x	negative	62*C	-	-

Exp 4

Segment

Annealing Temperature

Result

a	STAT1	56*C	-	-
b	V_STAT1	56*C	-	-
c	Fusion Antibody receptor	56*C	5%	1095bp
d	Signal peptide	56*C	-	-
e	Ig-like	56*C	80%	339bp
f	Signal Peptide + Ig-like	56*C	-	-
g	Antibody	56*C	80%	669bp
h	V_Fusion Antibody Receptor	56*C	-	-
i	B_FGFR1	56*C	-	-
j	VB_FGFR1	56*C	-	-
x	negative	56*C	-	-

Exp 5

Segment

Annealing Temperature

Result

a	V_STAT1	64*C	-	-
b	B_FGFR1	64*C	5%	1398bp
c	VB_FGFR1	64*C	-	-

Exp 6

Segment

Annealing Temperature

Result

a	V_STAT1	64*C	-	-
b	B_FGFR1	64*C	3%	1398bp
c	VB_FGFR1	64*C	-	-

Exp 7

Segment

Annealing Temperature

Result

a	3'UTR	62*C	-	-
b	5'UTR	62*C	-	-

Exp 8

Segment

Annealing Temperature

Result

a	V_STAT1	68*C	-	-
b	B_FGFR1	68*C	10%	1398bp
c	VB_FGFR1	68*C	-	-

Exp 9

Segment

Annealing Temperature

Result

a	V_STAT1	70*C	-	-
b	B_FGFR1	70*C	3%	1398bp
c	VB_FGFR1	70*C	-	-
c	5'UTR	70*C	-	-
c	3'UTR	70*C	-	-

Exp 10

Segment

Annealing Temperature

Result

a	V_STAT1	67*C	-	-
b	B_FGFR1	67*C	6%	1398bp
c	VB_FGFR1	67*C	-	-