Team:ETHZ Basel/Achievements/BioBrick Toolbox
From 2010.igem.org
BioBrick Toolbox
To construct the aimed fusion proteins, we first cloned our BioBricks into the storage vector pSEVA132 <partinfo>BBa_K422002</partinfo> (Victor de Lorenzo's lab, KanR, pBBR1 ori). All parts are sequence verified and compatible with BBF RFC28 (http://dspace.mit.edu/handle/1721.1/46721). A-parts N-Terminal fusion and C-parts C-terminal fusion. B-part is the linker that connects the two entities.
Check out our general scheme for the easy construction of Tom Knight's OAS and BBF RFC28 compatible working vectors [1]!
Chemotaxis BrickBox
Name | Insert | Orientation | Name | Insert | Orientation | Description | Favourite part |
---|---|---|---|---|---|---|---|
<partinfo>BBa_K422003</partinfo> | CheB | A-part | <partinfo>BBa_K422004</partinfo> | CheB | C-part | Demthylase: Demethylates methyl accepting chemotaxis proteins MCPs | |
<partinfo>BBa_K422005</partinfo> | CheR | A-part | <partinfo>BBa_K422006</partinfo> | CheR | C-part | Methyltransferase: Methylates methyl accepting chemotaxis proteins MCPs | |
<partinfo>BBa_K422007</partinfo> | CheY | A-part | <partinfo>BBa_K422008</partinfo> | CheY | C-part | Induces tumbling by interacting with the flagellar switch protein FliM |
Anchor BrickBox
Name | Insert | Orientation | Description | Favourite part |
---|---|---|---|---|
<partinfo>BBa_K422009</partinfo> | TetR | A-part | Tetracyclin repressor: Binds to its operator tetO for spatial localization of a fusion protein to the DNA. | |
<partinfo>BBa_K422010</partinfo> | trigA | A-part | Ribosome binding domain of the trigger factor: Binds to the large subunit of the ribosome. | |
<partinfo>BBa_K422011</partinfo> | MreB | C-part | Prokaryotic actin homologue: Assembles into helical filaments underneath the cytoplasmic membrane. |
Ligth sensor BrickBox
Name | Insert | Orientation | Description | Favourite part |
---|---|---|---|---|
<partinfo>BBa_K422012</partinfo> | Pif3 | C-part | Phytochrome interacting factor: N-Terminus of Pif3 selectively binds the Prf form of the phytochrome and rapidly dissociates in response to reconversion to the Pr state. | |
<partinfo>BBa_K422013</partinfo> | PhyB | C-part | Phytochromes type II: Exists in an biologically inactive form Pr absorbing red light and an active configuration Pfr which absorbs far-red light. |
Reporter BrickBox
Name | Insert | Orientation | Description | Favourite part |
---|---|---|---|---|
<partinfo>BBa_K422014</partinfo> | cyPet | A-part | CFP variant. |