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Team:KAIST-Korea/Project/Methods/PCR Result
From 2010.igem.org
Revision as of 03:28, 17 October 2010 by
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PCR Experiment
9/6 ~ 9/9 PCR Result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
dNTP (dNTP mixture 2.5mM TaKaRa)
2ul
Taq (Pfu Turbo® DNA Polymerase 2.5U/ μl STRATAGENE)
0.25ul
10x buffer (10x cloned Pfu Reaction buffer)
5ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
STAT1
53*C
-
-
b
V_STAT1
53*C
-
-
c
Fusion Antibody receptor
53*C
-
-
d
Signal peptide
56*C
-
-
e
Ig-like
56*C
-
-
f
Signal Peptide + Ig-like
56*C
-
-
g
Antibody
56*C
-
-
h
V_Fusion Antibody Receptor
53*C
-
-
i
B_FGFR1
56*C
-
-
j
VB_FGFR1
56*C
-
-
Exp 2
Segment
Annealing Temperature
Result
a
STAT1
48*C
60%
2139bp
b
V_STAT1
48*C
-
-
Exp 3
Segment
Annealing Temperature
Result
a
STAT1
50*C
100%
2139bp
b
V_STAT1
50*C
-
-
Exp 4
Segment
Annealing Temperature
Result
a
Fusion Antibody receptor
50*C
-
-
b
Signal peptide
50*C
-
-
c
Ig-like
50*C
60%
339bp
d
Signal Peptide + Ig-like
50*C
-
-
e
Antibody
50*C
-
-
f
V_Fusion Antibody Receptor
50*C
-
-
9/10 ~ 9/12 PCR Result
PCR composition
Materials
Amount
Template
150pmole
Primer A
50pmole
Primer B
50pmole
dNTP (dNTP mixture 2.5mM TaKaRa)
5ul
Taq (Pfu Turbo® DNA Polymerase 2.5U/ μl STRATAGENE)
0.25ul
10x buffer (10x cloned Pfu Reaction buffer)
5ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
STAT1
60*C
-
-
b
V_STAT1
60*C
-
-
c
Fusion Antibody receptor
60*C
70%
1095bp
d
Signal peptide
60*C
-
-
e
Ig-like
60*C
60%
339bp
f
Signal Peptide + Ig-like
60*C
-
-
g
Antibody
60*C
100%
669bp
h
V_Fusion Antibody Receptor
60*C
-
-
i
B_FGFR1
60*C
-
-
j
VB_FGFR1
60*C
-
-
x1
negative 1
60*C
-
-
x2
negative 2
60*C
-
-
Exp 2
Segment
Annealing Temperature
Result
a
STAT1
58*C
60%
2139bp
b
V_STAT1
58*C
-
-
c
Fusion Antibody receptor
58*C
80%
1095bp
d
Signal peptide
58*C
80%
87bp
e
Ig-like
58*C
100%
339bp
f
Signal Peptide + Ig-like
58*C
80%
426bp
g
Antibody
58*C
100%
669bp
h
V_Fusion Antibody Receptor
58*C
-
-
i
B_FGFR1
58*C
-
-
j
VB_FGFR1
58*C
-
-
x
negative
58*C
-
-
Exp 3
Segment
Annealing Temperature
Result
a
STAT1
62*C
-
-
b
V_STAT1
62*C
-
-
c
Fusion Antibody receptor
62*C
10%
1095bp
d
Signal peptide
62*C
-
-
e
Ig-like
62*C
-
-
f
Signal Peptide + Ig-like
62*C
-
-
g
Antibody
62*C
-
-
h
V_Fusion Antibody Receptor
62*C
-
-
i
B_FGFR1
62*C
-
-
j
VB_FGFR1
62*C
-
-
x
negative
62*C
-
-
Exp 4
Segment
Annealing Temperature
Result
a
STAT1
56*C
-
-
b
V_STAT1
56*C
-
-
c
Fusion Antibody receptor
56*C
5%
1095bp
d
Signal peptide
56*C
-
-
e
Ig-like
56*C
80%
339bp
f
Signal Peptide + Ig-like
56*C
-
-
g
Antibody
56*C
80%
669bp
h
V_Fusion Antibody Receptor
56*C
-
-
i
B_FGFR1
56*C
-
-
j
VB_FGFR1
56*C
-
-
x
negative
56*C
-
-
Exp 5
Segment
Annealing Temperature
Result
a
V_STAT1
64*C
-
-
b
B_FGFR1
64*C
5%
1398bp
c
VB_FGFR1
64*C
-
-
Exp 6
Segment
Annealing Temperature
Result
a
V_STAT1
64*C
-
-
b
B_FGFR1
64*C
3%
1398bp
c
VB_FGFR1
64*C
-
-
Exp 7
Segment
Annealing Temperature
Result
a
3'UTR
62*C
-
-
b
5'UTR
62*C
-
-
Exp 8
Segment
Annealing Temperature
Result
a
V_STAT1
68*C
-
-
b
B_FGFR1
68*C
10%
1398bp
c
VB_FGFR1
68*C
-
-
Exp 9
Segment
Annealing Temperature
Result
a
V_STAT1
70*C
-
-
b
B_FGFR1
70*C
3%
1398bp
c
VB_FGFR1
70*C
-
-
c
5'UTR
70*C
-
-
c
3'UTR
70*C
-
-
Exp 10
Segment
Annealing Temperature
Result
a
V_STAT1
67*C
-
-
b
B_FGFR1
67*C
6%
1398bp
c
VB_FGFR1
67*C
-
-
9/13 ~ 9/16 PCR Result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
STAT1
50*C
100%
2139bp
b
STAT1
52*C
100%
2139bp
c
STAT1
54*C
100%
2139bp
d
STAT1
56*C
100%
2139bp
e
STAT1
58*C
100%
2139bp
f
STAT1
60*C
100%
2139bp
g
V_STAT1
50*C
100%
2151bp
h
V_STAT1
52*C
100%
2151bp
i
V_STAT1
54*C
100%
2151bp
j
V_STAT1
56*C
100%
2151bp
k
V_STAT1
58*C
100%
2151bp
l
V_STAT1
60*C
100%
2151bp
Exp 2
Segment
Annealing Temperature
Result
a
B_FGFR
50*C
100%
1398bp
b
B_FGFR
52*C
100%
1398bp
c
B_FGFR
54*C
100%
1398bp
d
B_FGFR
56*C
100%
1398bp
e
B_FGFR
58*C
100%
1398bp
f
B_FGFR
60*C
100%
1398bp
g
VB_FGFR
50*C
100%
1420bp
h
VB_FGFR
52*C
100%
1420bp
i
VB_FGFR
54*C
100%
1420bp
j
VB_FGFR
56*C
100%
1420bp
k
VB_FGFR
58*C
100%
1420bp
l
VB_FGFR
60*C
100%
1420bp
Exp 3
Segment
Annealing Temperature
Result
a
Signal peptide
61*C
30%
87bp
b
Ig-like
61*C
100%
339bp
c
Signal peptide + Ig-like
61*C
100%
426bp
d
Signal peptide
59*C
30%
87bp
e
Ig-like
59*C
100%
339bp
f
Signal peptide + Ig-like
59*C
100%
426bp
g
3'UTR
52*C
50%
444bp
h
3'UTR
54*C
50%
444bp
i
3'UTR
56*C
100%
444bp
j
3'UTR
58*C
100%
444bp
k
3'UTR
60*C
100%
444bp
l
5'UTR
52*C
100%
500bp
m
5'UTR
54*C
100%
500bp
n
5'UTR
56*C
100%
500bp
o
5'UTR
58*C
100%
500bp
p
5'UTR
69*C
70%
500bp
Exp 4
Segment
Annealing Temperature
Result
a
F_Fusion antibody receptor
60*C
100%
1095bp
b
F_Fusion antibody receptor
58*C
100%
1095bp
c
Antibody
60*C
100%
669bp
d
Antibody
58*C
100%
669bp
e
VF_Fusion antibody receptor
60*C
100%
1107bp
f
VF_Fusion antibody receptor
58*C
100%
1107bp
9/17 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/18 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/19 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/21 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/27 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/28 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/17 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/17 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/17 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/17 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp
9/17 PCR result
PCR composition
Materials
Amount
Template
100pmole
Primer A
50pmole
Primer B
50pmole
Bioneer Accupower HF PCR premix
< 1ul
DW (3rd sterile water)
rest
Total
50ul
Exp 1
Segment
Annealing Temperature
Result
a
Selection marker(41)
50*C
0%
--
b
Selection marker(41)
52*C
0%
--
c
Selection marker(41)
54*C
0%
--
d
Selection marker(41)
56*C
0%
--
e
Selection marker(42)
50*C
0%
--
f
Selection marker(42)
52*C
0%
--
g
Selection marker(42)
54*C
0%
--
h
Selection marker(42)
56*C
0%
--
i
F_Fusion antibody receptor
54*C
30%
1107bp
j
F_Fusion antibody receptor
54*C
50%
1107bp
k
B_Fusion antibody receptor
54*C
100%
1398bp
4
l
B_Fusion antibody receptor
54*C
100%
1398bp
Exp 2
Segment
Annealing Temperature
Result
a
HA1
50*C
100%
87bp
b
HA1
52*C
100%
87bp
c
HA1
54*C
100%
87bp
d
HA1
56*C
100%
87bp
e
HA2
50*C
80%
87bp
f
HA2
52*C
80%
87bp
g
HA2
54*C
80%
87bp
h
HA2
56*C
80%
87bp
i
Proximal promoter
50*C
100%
120bp
j
Proximal promoter
52*C
100%
120bp
k
Proximal promoter
54*C
100%
120bp
l
Proximal promoter
56*C
100%
120bp
m
5' UTR
54*C
100%
500bp
n
5' UTR
54*C
100%
500bp
o
3' UTR
54*C
100%
444bp
p
3' UTR
54*C
100%
444bp