Team:Stanford/Notebook/Lab Work/Week 5
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7/19 Monday
Laura's Notebook
set up the following ligations from the gel extractions done by me, Karina, and Francisco on Friday, 7/14/10)
- Francisco ran and imaged diagnostic gel on Friday
Ligation Recipe | |
---|---|
dH2O | none |
vector (with terminators attached) | 5.0 uL |
insert (RFP or GFP) | 12.0 uL |
10X buffer | 2.0 uL |
T4 ligase | 1.0 uL |
- normally run for 10 minutes at room temperature, overnight this time (started at 11:30 am)
Nanodrop data (deemed unreliable based on 260/230, possibly due do residual EtBr contamination)
part | 260/280 | 260/230 | ng/uL |
vector/terminator | 1.77 | 0.03 | 19.1 |
RFP | 1.86 | 0.02 | 16.2 |
GFP | 1.83 | 0.02 | 14.8 |
7/20 Tuesday
Laura's Lab Notebook
helped Alex with preparation of competent cells
- see protocol: [http://openwetware.org/wiki/Stanford/BIOE44:Module_1:Day3 Preparing Electrocompetent Cells]
ran diagnostic gel for PCR-assembled DNA (Karina set up PCR rxns yesterday)
- order on gel:
- 100 bp ladder
- RSID1/RBS
- RSID2/RBS