Team:TU Delft/29 July 2010 content
From 2010.igem.org
Lab work
Alkane Degradation
PCR Amplification
K398007A, K398008A, K398009A, K398010A, K398017A, K398018A, K398019A, B0015 were amplified with the universal primers G00100 and G00101. The product was put on 1% agarose gel:
Lane Description:
# | Description | Expected Length (bp) | Primers | Status | Remarks |
M1 | SmartLadder | n/a | n/a | n/a | |
1 | PCR product of 007 | 1616 | G00101 + G00101 | ✔ | |
2 | PCR product of 008 | 473 | G00101 + G00101 | ✔ | |
3 | PCR product of 009 | 482 | G00101 + G00101 | ✔ | |
4 | PCR product of 010 | 1505 | G00101 + G00101 | ✔ | |
5 | PCR product of 017 | 1625 | G00101 + G00101 | ✔ | |
6 | PCR product of 018 | 1052 | G00101 + G00101 | ✔ | |
7 | PCR product of 019 | 1796 | G00101 + G00101 | ✔ | |
8 | PCR product of B0015 | 445 | G00101 + G00101 | ✔ |
The PCR products were subsequently digested:
# | Sample | Enzyme 1 | Enzyme 2 | Buffer | BSA | Needed fragment |
1 | 40 μL PCR product 007 | EcoRI | SpeI | 2 (BioLabs) | ✓ | ‘E–007–S’ |
2 | 40 μL PCR product 008 | XbaI | PstI | 2 (BioLabs) | ✓ | ‘X–008-P’ |
3 | 40 μL PCR product 009 | EcoRI | SpeI | 2 (BioLabs) | ✓ | ‘E–009–S’ |
4 | 40 μL PCR product 010 | XbaI | PstI | 2 (BioLabs) | ✓ | ‘X–010-P’ |
5 | 40 μL PCR product 017 | EcoRI | SpeI | 2 (BioLabs) | ✓ | ‘E–009–S’ |
6 | 40 μL PCR product 018 | XbaI | PstI | 2 (BioLabs) | ✓ | ‘X–018-P’ |
7 | 40 μL PCR product 019 | EcoRI | SpeI | 2 (BioLabs) | ✓ | ‘E–019-S’ |
8 | 40 μL PCR product B0015 | XbaI | PstI | 2 (BioLabs) | ✓ | ‘X–B0015-P’ |