Team:LMU-Munich/ProSearch/Schedule

From 2010.igem.org

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=Environmental Conditions=
=Environmental Conditions=
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The [http://www.ncbi.nlm.nih.gov/sites/entrez?db=ncbisearch NCBI GEO] and [http://www.ebi.ac.uk/arrayexpress/browse.html httpArrayExpress] databases were extensively searched for environmental conditions leading to apoptosis in 293T cells and genes differentially expressed under these conditions. The following data was obtained:  
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The '''[http://www.ncbi.nlm.nih.gov/sites/entrez?db=ncbisearch NCBI GEO]''' and '''[http://www.ebi.ac.uk/arrayexpress/browse.html ArrayExpress]''' databases were extensively searched for environmental conditions leading to apoptosis in 293T cells and genes differentially expressed under these conditions. The following data was obtained:  
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{| class="wikitable" border="0"
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{| class="wikitable" border="0" style="width: 600px;"
|-
|-
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! Environmental Condition (EV) | align="center"
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! Environmental Condition (EV)
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! #genes selectively expressed in this EV | align="center"
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! #genes selectively expressed in this EV
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! Reference | align="center"
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! Reference
|-
|-
| Conduritol B Epoxide treatment
| Conduritol B Epoxide treatment
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| 57
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| align="center|"57
| row 1, cell 3
| row 1, cell 3
|-
|-
| Gammaherpesvirus
| Gammaherpesvirus
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| 103
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| align="center|103
| row 1, cell 3
| row 1, cell 3
|-
|-
| HIV integration
| HIV integration
-
| 1
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| align="center|1
| row 1, cell 3
| row 1, cell 3
|-
|-
| HLTV-1 p30
| HLTV-1 p30
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| 2291
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| align="center|2291
| row 1, cell 3
| row 1, cell 3
|-
|-
| Hypoxia
| Hypoxia
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| 2
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| align="center|2
| row 1, cell 3
| row 1, cell 3
|-
|-
| RCAS-beta-cateinS37A
| RCAS-beta-cateinS37A
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| 55
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| align="center|55
| row 1, cell 3
| row 1, cell 3
|}
|}

Revision as of 10:17, 26 September 2010


Cell Line

The cell line used in this project is the human embryonic kidney cell line 293T .

Environmental Conditions

The [http://www.ncbi.nlm.nih.gov/sites/entrez?db=ncbisearch NCBI GEO] and [http://www.ebi.ac.uk/arrayexpress/browse.html ArrayExpress] databases were extensively searched for environmental conditions leading to apoptosis in 293T cells and genes differentially expressed under these conditions. The following data was obtained:

Environmental Condition (EV) #genes selectively expressed in this EV Reference
Conduritol B Epoxide treatment "57 row 1, cell 3
Gammaherpesvirus 103 row 1, cell 3
HIV integration 1 row 1, cell 3
HLTV-1 p30 2291 row 1, cell 3
Hypoxia 2 row 1, cell 3
RCAS-beta-cateinS37A 55 row 1, cell 3


 

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