Team:Cambridge/PhosphoreumOligos

From 2010.igem.org

(Difference between revisions)
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ribA Reverse Primer:
ribA Reverse Primer:
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Sequence: tactagtagcggccgctgcagAAATGAACGTTAGTTCCAAC
+
:Sequence: tactagtagcggccgctgcagAAATGAACGTTAGTTCCAAC
-
Structure: one hairpin in suffix/coding region
+
:Structure: one hairpin in suffix/coding region
-
Tm: 56.27 deg
+
:Tm: 56.27 deg
-
dG: 0.48 kcal/mol
+
:dG: 0.48 kcal/mol
luxE Reverse Primer:
luxE Reverse Primer:

Revision as of 16:32, 13 August 2010

Phosphoreum Oligos

ribA Reverse Primer:

Sequence: tactagtagcggccgctgcagAAATGAACGTTAGTTCCAAC
Structure: one hairpin in suffix/coding region
Tm: 56.27 deg
dG: 0.48 kcal/mol

luxE Reverse Primer:

Sequence: tactagtagcggccgctgcagTATGATCTATTTTAAACCTGATGA

Structure: one hairpin in suffix

Tm: 56.59 deg

dG: 0.57 kcal/mol

Pbad Reverse C-end: Sequence: tctttatcatacaatctccttaGCTAGCCCAAAAAAAC Structure: one small hairpin in gene Tm: 53.68 deg dG: 2.30 kcal/mol

Lux C forward primer: Sequence: AGGAGATTGTATGATAAAGAAAAT Tm: 56.26 dG: 1.98


lux A(XbaI)

forward TACTGGACActagaGCATCATT Tm=58.46 dG=1.53

reverse AATGATGCtctagTGTCCAGTA Tm=58.46 dG=2.53


lux E(SpeI)

forward GTAGTGGTacCagtGGTGTAAA Tm=58.54 dG=1.41

reverse TTTACACCactGgtACCACTAC Tm=58.54 dG=1.25


lux G(XbaI) forward TGCCTGTCctagaAAACTTT Tm=58.56 dG=1.77

reverse AAAGTTTtctagGACAGGCA Tm=58.56 dG=1.33


ribB (EcoRI i)

forward GAATATGGTgaGttcAATATGATC Tm=58.39 dG=1.91

reverse GATCATATTgaaCtcACCATATTC Tm=58.39 dG=1.91

ribB (EcoRI ii)

forward TGAGCCgaaCtcTCAAAC Tm=59.64 dG=1.26

reverse GTTTGAgaGttcGGCTCA Tm=59.64 dG=1.16