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Team:ETHZ Basel/Modeling/Light Switch
From 2010.igem.org
(Difference between revisions)
| Line 6: | Line 6: | ||
== Goals == | == Goals == | ||
# Implement original model | # Implement original model | ||
| + | ## Plot Figure 6a from [[Team:ETHZ Basel/Modeling/Sorokina2009#References|[1]]] | ||
# Link model to chemotaxis ODE models | # Link model to chemotaxis ODE models | ||
# Adapt model to experimental setup | # Adapt model to experimental setup | ||
| Line 12: | Line 13: | ||
Please find the current version on the SVN-Server. | Please find the current version on the SVN-Server. | ||
* (7/25): start development by George | * (7/25): start development by George | ||
| - | * (7/27): original model partly implemented (Goal 1) | + | * (7/27): original model partly implemented, not yet working (Goal 1.1) |
== Tasks == | == Tasks == | ||
| - | + | * Help wanted to fix original model implementation | |
== Results == | == Results == | ||
| + | |||
== References == | == References == | ||
[1] [http://www.jbioleng.org/content/3/1/15 Sorokina et al: A switchable light-input, light-output system modelled and constructed in yeast. J Biol Eng. 2009 Sep 17;3:15.] | [1] [http://www.jbioleng.org/content/3/1/15 Sorokina et al: A switchable light-input, light-output system modelled and constructed in yeast. J Biol Eng. 2009 Sep 17;3:15.] | ||
Revision as of 19:39, 27 July 2010
Modeling of the light-input, light-output system
The light-input, light-output system PIF3-PhyB will be used to control spatial localization of key-proteins from chemotaxis. A model will be implemented according to a recent publication: [1].
Goals
- Implement original model
- Plot Figure 6a from [1]
- Link model to chemotaxis ODE models
- Adapt model to experimental setup
Status
Please find the current version on the SVN-Server.
- (7/25): start development by George
- (7/27): original model partly implemented, not yet working (Goal 1.1)
Tasks
- Help wanted to fix original model implementation
Results
References
[1] [http://www.jbioleng.org/content/3/1/15 Sorokina et al: A switchable light-input, light-output system modelled and constructed in yeast. J Biol Eng. 2009 Sep 17;3:15.]
