Team:Alberta/Plates

From 2010.igem.org

(Difference between revisions)
Line 13: Line 13:
__notoc__
__notoc__
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== Sintered Plastic ==
+
=== Sintered Plastic ===
==22-06-10==
==22-06-10==
Line 26: Line 26:
*according to materials sheet, the ultra-fine sheet is a bacterial barrier
*according to materials sheet, the ultra-fine sheet is a bacterial barrier
-
Procedure
+
Procedure:
-
:1) each 100mm x 100mm sample was cut into...
+
:1) cut each 100mm x 100mm sample with an exacto-knife into into disks approximately 100mm in diameter and inserted into petri dishes
-
TO BE CONTINUED
+
:2) added 10ml of LB and 40µl of chloranphenicol to each plate
 +
:3) incubated the plates overnight at 37C
-
All of the following steps were performed in a safety cabinet under sterile conditions.
+
Observations:  
-
:1)  disassembled a Degree deodorant stick and soaked in ethanol
+
: - 6.0mm fine grade sheet was to thick to cut with an exacto knife and so was not used
-
:2)  removed the raising platform and covered it with Parafilm
+
: - both sheets did not absorb the LB immediately; the LB beaded on the surface
-
:3)  coated the insides of the tube with mineral oil
+
-
:5)  removed platform and poured LB agar into the base of the stick, waited until it solidified
+
-
:6)  the Parafilmed platform was put back into the stick and lowered maximally
+
-
:7)  LB agar was poured on top of the platform, until the tube was full, waited until it solidifed
+
-
:8)  The top of the LB agar was sliced off with an ethanol-sterilized knife
+
-
:9)  400ul of transformed competent cells were plated on the stick as if it was a standard LB agar plate
+
-
:10)  L.B.O. stick was incubated overnight at 37C
+
 +
== 23-06-10 ==
Observations:
Observations:
-
: - although the knife cut through the LB agar easily, it was difficult to produce a completely flat surface
+
: - 7mL LB left from 3.0mm ultra-fine sheet (3mL absorbed)
-
: - solidified LB agar was effectively raised and lowered using the dial
+
: - 8mL LB left from 4.5mm medium-grade (2mL absorbed)
-
: - after incubation, a bacterial lawn was observed and a distinct E.coli smell was present
+
: - 3.0mm ultra-fine PE sheet with mean pore size 14µm is more absorptive
 +
Procedure:
 +
:1) transferred both plastic disks into new, separate petri dishes
 +
:2) streaked plastic sheets with RFP-containing colonies
 +
:3) incubated in 37C overnight
-
==29-06-10==
+
== 24-06-10 ==
-
</p>
+
: - no growth after incubation
-
:1)  Followed procedure from June 26, 2010 to put new LB agar into the L.B.O. tube
+
: - plastic very dry
-
:2) Approximately 1cm was sliced off the top of the new LB agar with an ethanol-sterilized razor blade
+
: - plastic sheets deemed too hydrophobic to retain aqueous LB
-
:3) L.B.O. stick was incubated overnight at 37C
+
 
 +
Procedure:
 +
:1) rubbed small amount of ethanol onto each plastic disk
 +
:2) followed by rubbing in milli-Q water to decrease the surface tension
Observations:
Observations:
-
: - no growth observed, tube must have been sterile
+
: - absorbency visibly increased
 +
:1) plastic was soaked in 95% ethanol and then put into the dessicator to dry out so that the plates are now reusable and sterile
-
==30-06-10==
+
Researched into hydrophilic sintered plastic. Possible, but too expensive to consider for the purpose of our project
-
:1) Streaked green colony from a plate of Cambridge parts
+
-
:2)  L.B.O. stick was incubated overnight at 37C
+
-
Observations:
+
=== L.B.O. ===
-
: - green streak and individual green colonies observed, along with a distinct E.coli smell
+
-
 
+
-
==05-07-10==
+
-
:1)  Approximately 1cm was sliced off the top of the used LB agar with an ethanol-sterilized razor blade
+
-
:2)  Streaked red, RFP-containing colony onto the LB agar surface.
+
-
:3)  L.B.O. stick was incubated overnight at 37C
+
-
 
+
-
Observations:
+
-
: - only a red streak and individual red colonies observed, along with a distinct E.coli smell
+
-
: - no remnants of green colonies visible
+
-
== L.B.O. ==
+
==24-06-10==
==24-06-10==

Revision as of 21:16, 26 July 2010

Notebook Building Parts Testing Parts Assembly Method Competent Cells Plates Kit Manual Software

Plates

Sintered Plastic

22-06-10

Creation of a reusable surface on which to grow bacteria.

Supplier: SPC Technologies Ltd. Sintered Plastic Samples

1) 3.0mm Ultra-Fine PE Sheet - mean pore size 14µm
2) 6.0mm Fine Grade PE Sheet - mean pore size 30µm
3) 4.5mm Medium Grade PE Sheet - mean pore size 88µm
  • according to materials sheet, the ultra-fine sheet is a bacterial barrier
Procedure:
1) cut each 100mm x 100mm sample with an exacto-knife into into disks approximately 100mm in diameter and inserted into petri dishes
2) added 10ml of LB and 40µl of chloranphenicol to each plate
3) incubated the plates overnight at 37C
Observations:
- 6.0mm fine grade sheet was to thick to cut with an exacto knife and so was not used
- both sheets did not absorb the LB immediately; the LB beaded on the surface

23-06-10

Observations:

- 7mL LB left from 3.0mm ultra-fine sheet (3mL absorbed)
- 8mL LB left from 4.5mm medium-grade (2mL absorbed)
- 3.0mm ultra-fine PE sheet with mean pore size 14µm is more absorptive

Procedure:

1) transferred both plastic disks into new, separate petri dishes
2) streaked plastic sheets with RFP-containing colonies
3) incubated in 37C overnight

24-06-10

- no growth after incubation
- plastic very dry
- plastic sheets deemed too hydrophobic to retain aqueous LB

Procedure:

1) rubbed small amount of ethanol onto each plastic disk
2) followed by rubbing in milli-Q water to decrease the surface tension

Observations:

- absorbency visibly increased
1) plastic was soaked in 95% ethanol and then put into the dessicator to dry out so that the plates are now reusable and sterile

Researched into hydrophilic sintered plastic. Possible, but too expensive to consider for the purpose of our project

L.B.O.

24-06-10

<p>Creation of "L.B.O.": a deodorant stick of LB agar

All of the following steps were performed in a safety cabinet under sterile conditions.

1) disassembled a Degree deodorant stick and soaked in ethanol
2) removed the raising platform and covered it with Parafilm
3) coated the insides of the tube with mineral oil
5) removed platform and poured LB agar into the base of the stick, waited until it solidified
6) the Parafilmed platform was put back into the stick and lowered maximally
7) LB agar was poured on top of the platform, until the tube was full, waited until it solidifed
8) The top of the LB agar was sliced off with an ethanol-sterilized knife
9) 400ul of transformed competent cells were plated on the stick as if it was a standard LB agar plate
10) L.B.O. stick was incubated overnight at 37C
Observations:
- although the knife cut through the LB agar easily, it was difficult to produce a completely flat surface
- solidified LB agar was effectively raised and lowered using the dial
- after incubation, a bacterial lawn was observed and a distinct E.coli smell was present

29-06-10

1) Followed procedure from June 26, 2010 to put new LB agar into the L.B.O. tube
2) Approximately 1cm was sliced off the top of the new LB agar with an ethanol-sterilized razor blade
3) L.B.O. stick was incubated overnight at 37C

Observations:

- no growth observed, tube must have been sterile


30-06-10

1) Streaked green colony from a plate of Cambridge parts
2) L.B.O. stick was incubated overnight at 37C

Observations:

- green streak and individual green colonies observed, along with a distinct E.coli smell

05-07-10

1) Approximately 1cm was sliced off the top of the used LB agar with an ethanol-sterilized razor blade
2) Streaked red, RFP-containing colony onto the LB agar surface.
3) L.B.O. stick was incubated overnight at 37C

Observations:

- only a red streak and individual red colonies observed, along with a distinct E.coli smell
- no remnants of green colonies visible