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Team:Harvard/parts
From 2010.igem.org
(Difference between revisions)
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<tr><td><b>name</b></td><td><b>biobrick name</b></td><td><b>original name</b></td><td><b>description</b></td><td><b>resistance (bacteria)</b></td><td><b>resistance (plants)</b></td><td><b>sequence</b></td></tr> | <tr><td><b>name</b></td><td><b>biobrick name</b></td><td><b>original name</b></td><td><b>description</b></td><td><b>resistance (bacteria)</b></td><td><b>resistance (plants)</b></td><td><b>sequence</b></td></tr> | ||
| - | <tr><td>V7</td><td>BBa_K382000</td><td>pORE Open Series Vector with BioBrick Sites (kan/pat)</td><td>Agrobacterium vector open series with biobrick cloning site</td><td> | + | <tr><td>V7</td><td>BBa_K382000</td><td>pORE Open Series Vector with BioBrick Sites (kan/pat)</td><td>Agrobacterium vector open series with biobrick cloning site</td><td>kan</td><td>pat</td><td><a href="http://openwetware.org/images/3/3b/V7.gb">link</a></td></tr> |
| - | <tr><td>V8</td><td>BBa_K382001</td><td>pORE Open Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector open series with biobrick cloning site</td><td> | + | <tr><td>V8</td><td>BBa_K382001</td><td>pORE Open Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector open series with biobrick cloning site</td><td>kan</td><td>nptII</td><td><a href="http://openwetware.org/images/0/0f/V8.gb">link</a></td></tr> |
| - | <tr><td>V9</td><td>BBa_K382002</td><td>pORE Expression Series Vector with BioBrick Sites (kan/pat)</td><td>Agrobacterium vector with ENTCUP2 promoter and biobrick cloning site</td><td> | + | <tr><td>V9</td><td>BBa_K382002</td><td>pORE Expression Series Vector with BioBrick Sites (kan/pat)</td><td>Agrobacterium vector with ENTCUP2 promoter and biobrick cloning site</td><td>kan</td><td>pat</td><td><a href="http://openwetware.org/images/d/d2/V9.gb">link</a></td></tr> |
| - | <tr><td>V10</td><td>BBa_K382003</td><td>pORE Expression Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector with ENTCUP2 promoter and biobrick cloning site</td><td> | + | <tr><td>V10</td><td>BBa_K382003</td><td>pORE Expression Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector with ENTCUP2 promoter and biobrick cloning site</td><td>kan</td><td>nptII</td><td><a href="http://openwetware.org/images/3/33/V10.gb">link</a></td></tr> |
| - | <tr><td>V11</td><td>BBa_K382004</td><td>pORE Reporter Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector with gusA reporter and biobrick cloning site</td><td> | + | <tr><td>V11</td><td>BBa_K382004</td><td>pORE Reporter Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector with gusA reporter and biobrick cloning site</td><td>kan</td><td>nptII</td><td><a href="http://openwetware.org/images/5/56/V11.gb">link</a></td></tr> |
| - | <tr><td>V12</td><td>BBa_K382005</td><td>pORE Reporter Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector with smgfp reporter and biobrick cloning site</td><td> | + | <tr><td>V12</td><td>BBa_K382005</td><td>pORE Reporter Series Vector with BioBrick Sites (kan/nptII)</td><td>Agrobacterium vector with smgfp reporter and biobrick cloning site</td><td>kan</td><td>nptII</td><td><a href="http://openwetware.org/images/a/a8/V12.gb">link</a></td></tr> |
<tr><td>C1</td><td>BBa_K382010</td><td>amiRNA LUT2</td><td>amiRNA construct for lycopene epsilon cyclase (LUT2) knockdown</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/b/b9/Lut2.txt">link</a></td></tr> | <tr><td>C1</td><td>BBa_K382010</td><td>amiRNA LUT2</td><td>amiRNA construct for lycopene epsilon cyclase (LUT2) knockdown</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/b/b9/Lut2.txt">link</a></td></tr> | ||
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<tr><td>C3</td><td>BBa_K382012</td><td>amiRNA LYC</td><td>amiRNA construct for lycopene beta cyclase (LYC) knockdown</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/0/0f/LYC.txt">link</a></td></tr> | <tr><td>C3</td><td>BBa_K382012</td><td>amiRNA LYC</td><td>amiRNA construct for lycopene beta cyclase (LYC) knockdown</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/0/0f/LYC.txt">link</a></td></tr> | ||
| - | <tr><td>A3</td><td>BBa_K382014</td><td>ihpRNA Bet</td><td>Intron hairpin Bet Knockdown construct</td><td> | + | <tr><td>A3</td><td>BBa_K382014</td><td>ihpRNA Bet</td><td>Intron hairpin Bet Knockdown construct</td><td>amp</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/e/ee/Bet1.txt">link</a></td></tr> |
<tr><td>A4</td><td>BBa_K382015</td><td>ihpRNA LTP</td><td>Intron hairpin LTP Knockdown construct</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/6/6f/LTP.txt">link</a></td></tr> | <tr><td>A4</td><td>BBa_K382015</td><td>ihpRNA LTP</td><td>Intron hairpin LTP Knockdown construct</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/6/6f/LTP.txt">link</a></td></tr> | ||
| - | <tr><td>A2</td><td>BBa_K382017</td><td>amiRNA LTP </td><td>LTP knockdown construct</td><td> | + | <tr><td>A2</td><td>BBa_K382017</td><td>amiRNA LTP </td><td>LTP knockdown construct</td><td>amp</td><td>-</td><td> <a href="https://2010.igem.org/Team:Harvard/allergy/LTP.txt">link</a></td></tr> |
| - | <tr><td>A4</td><td>BBa_K382018</td><td>PDK intron hairpin</td><td>Intron hairpin construct</td><td> | + | <tr><td>A4</td><td>BBa_K382018</td><td>PDK intron hairpin</td><td>Intron hairpin construct</td><td>amp</td><td>-</td><td><a href="http://partsregistry.org/Part:BBa_K382018">link</a></td></tr> |
<tr><td>A5</td><td>BBa_K382019</td><td>ihpRNA Ger </td><td>Intron hairpin Ger Knockdown construct</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/8/82/Ger.txt">link</a></td></tr> | <tr><td>A5</td><td>BBa_K382019</td><td>ihpRNA Ger </td><td>Intron hairpin Ger Knockdown construct</td><td>chloramphenicol</td><td>-</td><td><a href="https://static.igem.org/mediawiki/2010/8/82/Ger.txt">link</a></td></tr> | ||
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<tr><td>GF5</td><td>BBa_K382030</td><td>RXRHm</td><td>Human Retinoic Acid Receptor performs a function analogous to RXRLc. RXRHm has been shown to be sensitive to lower level of methoxyfenozide, but also to have higher background activation in the absence of methoxyfenozide.</td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f5">link</a></td></tr> | <tr><td>GF5</td><td>BBa_K382030</td><td>RXRHm</td><td>Human Retinoic Acid Receptor performs a function analogous to RXRLc. RXRHm has been shown to be sensitive to lower level of methoxyfenozide, but also to have higher background activation in the absence of methoxyfenozide.</td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f5">link</a></td></tr> | ||
| - | <tr><td>GF4</td><td>BBa_K382031</td><td>RXRLc<td> Part of the Locust Retinoic Acid Receptor and VP16 activation domain fusion protein. RXRLc binds EcR in presence of Methoxyfenozide</td><td> | + | <tr><td>GF4</td><td>BBa_K382031</td><td>RXRLc<td> Part of the Locust Retinoic Acid Receptor and VP16 activation domain fusion protein. RXRLc binds EcR in presence of Methoxyfenozide</td><td>amp</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f4">link</a></td></tr> |
<tr><tr><td></td><td>BBa_K382033</td><td>Ecdysone Receptor</td><td> Part of the fusion protein of Ecdysone receptor and Gal4 DNA binding domain. Ecdysone receptor binds RXR-VP16 in presence of Methoxyfenozide </td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f7">link</a></td></tr> | <tr><tr><td></td><td>BBa_K382033</td><td>Ecdysone Receptor</td><td> Part of the fusion protein of Ecdysone receptor and Gal4 DNA binding domain. Ecdysone receptor binds RXR-VP16 in presence of Methoxyfenozide </td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f7">link</a></td></tr> | ||
| - | <tr><tr><td></td><td>BBa_K382034</td><td>Act2pLacO</td><td>Actin promoter with LacO sites </td><td> | + | <tr><tr><td></td><td>BBa_K382034</td><td>Act2pLacO</td><td>Actin promoter with LacO sites </td><td>amp</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f12">link</a></td></tr> |
<tr><td>GF3</td><td>BBa_K382035</td><td>LacIN</td><td>Lac Inhibitor with Nuclear Localization sequence - transcriptional inhibitor of the Act2LacO promoter</td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f3">link</a></td></tr> | <tr><td>GF3</td><td>BBa_K382035</td><td>LacIN</td><td>Lac Inhibitor with Nuclear Localization sequence - transcriptional inhibitor of the Act2LacO promoter</td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f3">link</a></td></tr> | ||
| - | <tr><td>GF4</td><td>BBa_K382031</td><td>RXRLc<td> Part of the Locust Retinoic Acid Receptor and VP16 activation domain fusion protein. RXRLc binds EcR in presence of Methoxyfenozide</td><td> | + | <tr><td>GF4</td><td>BBa_K382031</td><td>RXRLc<td> Part of the Locust Retinoic Acid Receptor and VP16 activation domain fusion protein. RXRLc binds EcR in presence of Methoxyfenozide</td><td>amp</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f4">link</a></td></tr> |
| - | <tr><td>GF5</td><td>BBa_K382036</td><td>RXRHm</td><td>Human Retinoic Acid Receptor performs a function analogous to RXRLc. RXRHm has been shown to be sensitive to lower level of methoxyfenozide, but also to have higher background activation in the absence of methoxyfenozide.</td><td> | + | <tr><td>GF5</td><td>BBa_K382036</td><td>RXRHm</td><td>Human Retinoic Acid Receptor performs a function analogous to RXRLc. RXRHm has been shown to be sensitive to lower level of methoxyfenozide, but also to have higher background activation in the absence of methoxyfenozide.</td><td>amp</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f5">link</a></td></tr> |
| - | <tr><tr><td></td><td>BBa_K382037</td><td>Ecdysone Receptor</td><td> Part of the fusion protein of Ecdysone receptor and Gal4 DNA binding domain. Ecdysone receptor binds RXR-VP16 in presence of Methoxyfenozide </td><td> | + | <tr><tr><td></td><td>BBa_K382037</td><td>Ecdysone Receptor</td><td> Part of the fusion protein of Ecdysone receptor and Gal4 DNA binding domain. Ecdysone receptor binds RXR-VP16 in presence of Methoxyfenozide </td><td>amp</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/f7">link</a></td></tr> |
<tr><td>F6</td><td>BBa_K382040</td><td>Brazzein YFP2x C-terminus</td><td>Brazzein with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expression</td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/F6">link</a></td></tr> | <tr><td>F6</td><td>BBa_K382040</td><td>Brazzein YFP2x C-terminus</td><td>Brazzein with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expression</td><td>chloramphenicol</td><td>-</td><td><a href="https://2010.igem.org/Team:Harvard/F6">link</a></td></tr> | ||
Revision as of 13:44, 27 October 2010
parts
| name | biobrick name | original name | description | resistance (bacteria) | resistance (plants) | sequence |
| V7 | BBa_K382000 | pORE Open Series Vector with BioBrick Sites (kan/pat) | Agrobacterium vector open series with biobrick cloning site | kan | pat | link |
| V8 | BBa_K382001 | pORE Open Series Vector with BioBrick Sites (kan/nptII) | Agrobacterium vector open series with biobrick cloning site | kan | nptII | link |
| V9 | BBa_K382002 | pORE Expression Series Vector with BioBrick Sites (kan/pat) | Agrobacterium vector with ENTCUP2 promoter and biobrick cloning site | kan | pat | link |
| V10 | BBa_K382003 | pORE Expression Series Vector with BioBrick Sites (kan/nptII) | Agrobacterium vector with ENTCUP2 promoter and biobrick cloning site | kan | nptII | link |
| V11 | BBa_K382004 | pORE Reporter Series Vector with BioBrick Sites (kan/nptII) | Agrobacterium vector with gusA reporter and biobrick cloning site | kan | nptII | link |
| V12 | BBa_K382005 | pORE Reporter Series Vector with BioBrick Sites (kan/nptII) | Agrobacterium vector with smgfp reporter and biobrick cloning site | kan | nptII | link |
| C1 | BBa_K382010 | amiRNA LUT2 | amiRNA construct for lycopene epsilon cyclase (LUT2) knockdown | chloramphenicol | - | link |
| C2 | BBa_K382011 | amiRNA BETA-OHASE 1 | amiRNA construct for carotene beta-ring hydroxylase (BETA-OHASE 1) knockdown | chloramphenicol | - | link |
| C3 | BBa_K382012 | amiRNA LYC | amiRNA construct for lycopene beta cyclase (LYC) knockdown | chloramphenicol | - | link |
| A3 | BBa_K382014 | ihpRNA Bet | Intron hairpin Bet Knockdown construct | amp | - | link |
| A4 | BBa_K382015 | ihpRNA LTP | Intron hairpin LTP Knockdown construct | chloramphenicol | - | link |
| A2 | BBa_K382017 | amiRNA LTP | LTP knockdown construct | amp | - | link |
| A4 | BBa_K382018 | PDK intron hairpin | Intron hairpin construct | amp | - | link |
| A5 | BBa_K382019 | ihpRNA Ger | Intron hairpin Ger Knockdown construct | chloramphenicol | - | link |
| F4 | BBa_K382020 | Brazzein | Sweet-tasting protein. 54 amino acid sequence. | chloramphenicol | - | link |
| F5 | BBa_K382021 | Miraculin | Taste-inverting protein turns sour to sweet. 191 amino acid sequence | chloramphenicol | - | link |
| F1 | BBa_K382022 | pENTCUP2 promoter | Plant specific promoter. Used to drive expression of our flavor constructs in plants. | chloramphenicol | - | link |
| F2 | BBa_K382023 | NOSt terminator | Plant specific terminator. Terminates transcription but no stop codon on end. | chloramphenicol | - | link |
| F3 | BBa_K382024 | NOSt terminator + stop | Plant specific terminator. Terminates transcription with stop codon on 5' end. | chloramphenicol | - | link |
| BBa_K382025 | Miraculin StrepII N-terminus | Miraculin with StrepII tag on C-terminus for Western Blot. | chloramphenicol | - | link | |
| BBa_K382026 | Brazzein StrepII N-terminus | Brazzein with StrepII tag on C-terminus for Western Blot. | chloramphenicol | - | link | |
| F9 | BBa_K382027 | Miraculin StrepII C-terminus | Miraculin with StrepII tag on C-terminus for Western Blot. | chloramphenicol | - | link |
| F8 | BBa_K382028 | Brazzein StrepII C-terminus | Brazzein with StrepII tag on C-terminus for Western Blot. | chloramphenicol | - | link |
| GF5 | BBa_K382030 | RXRHm | Human Retinoic Acid Receptor performs a function analogous to RXRLc. RXRHm has been shown to be sensitive to lower level of methoxyfenozide, but also to have higher background activation in the absence of methoxyfenozide. | chloramphenicol | - | link |
| GF4 | BBa_K382031 | RXRLc | Part of the Locust Retinoic Acid Receptor and VP16 activation domain fusion protein. RXRLc binds EcR in presence of Methoxyfenozide | amp | - | link |
| BBa_K382033 | Ecdysone Receptor | Part of the fusion protein of Ecdysone receptor and Gal4 DNA binding domain. Ecdysone receptor binds RXR-VP16 in presence of Methoxyfenozide | chloramphenicol | - | link | |
| BBa_K382034 | Act2pLacO | Actin promoter with LacO sites | amp | - | link | |
| GF3 | BBa_K382035 | LacIN | Lac Inhibitor with Nuclear Localization sequence - transcriptional inhibitor of the Act2LacO promoter | chloramphenicol | - | link |
| GF4 | BBa_K382031 | RXRLc | Part of the Locust Retinoic Acid Receptor and VP16 activation domain fusion protein. RXRLc binds EcR in presence of Methoxyfenozide | amp | - | link |
| GF5 | BBa_K382036 | RXRHm | Human Retinoic Acid Receptor performs a function analogous to RXRLc. RXRHm has been shown to be sensitive to lower level of methoxyfenozide, but also to have higher background activation in the absence of methoxyfenozide. | amp | - | link |
| BBa_K382037 | Ecdysone Receptor | Part of the fusion protein of Ecdysone receptor and Gal4 DNA binding domain. Ecdysone receptor binds RXR-VP16 in presence of Methoxyfenozide | amp | - | link | |
| F6 | BBa_K382040 | Brazzein YFP2x C-terminus | Brazzein with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expression | chloramphenicol | - | link |
| F7 | BBa_K382041 | Miraculin YFP2x C-terminus | Miraculin with two Yellow Fluorescent Protein sequences on C-Terminus. Allows visualization of expression | chloramphenicol | - | link |
| BBa_K382050 | Miraculin | Taste-inverting protein turns sour to sweet. 191 amino acid sequence | kan | pat | link | |
| BBa_K382051 | Miraculin | Taste-inverting protein turns sour to sweet. 191 amino acid sequence | kan | nptII | link | |
| BBa_K382052 | Brazzein | Sweet-tasting protein. 54 amino acid sequence. | kan | pat | link | |
| BBa_K382053 | Brazzein | Sweet-tasting protein. 54 amino acid sequence. | kan | nptII | link | |
| BBa_K382054 | amiRNA GFP | amiRNA construct for GFP knockdown | kan | pat | link | |
| BBa_K382055 | amiRNA GFP | amiRNA construct for GFP knockdown | kan | nptII | link | |
| BBa_K382058 | amiRNA LUT2 | amiRNA construct for lycopene epsilon cyclase (LUT2) knockdown | kan | pat | link | |
| BBa_K382059 | amiRNA BETA-OHASE 1 | amiRNA construct for carotene beta-ring hydroxylase (BETA-OHASE 1) knockdown | kan | pat | link | |
| BBa_K382060 | amiRNA LYC | amiRNA construct for lycopene beta cyclase (LYC) knockdown | kan | pat | link | |
| BBa_K382061 | amiRNA LUT2 | amiRNA construct for lycopene epsilon cyclase (LUT2) knockdown | kan | nptII | link | |
| BBa_K382062 | amiRNA BETA-OHASE 1 | amiRNA construct for carotene beta-ring hydroxylase (BETA-OHASE 1) knockdown | kan | nptII | link | |
| BBa_K382063 | amiRNA LYC | amiRNA construct for lycopene beta cyclase (LYC) knockdown | kan | nptII | link | |
| BBa_K382064 | amiRNA LTP | LTP knockdown construct | kan | pat | link | |
| BBa_K382065 | amiRNA LTP | LTP knockdown construct | kan | nptII | link | |
| BBa_K382066 | ihpRNA Ger | Intron hairpin Ger Knockdown construct | kan | pat | link | |
| BBa_K382067 | ihpRNA Ger | Intron hairpin Ger Knockdown construct | kan | nptII | link | |
| BBa_K382068 | ihpRNA BetV1 | Intron hairpin Bet Knockdown construct | kan | pat | link | |
| BBa_K382069 | ihpRNA BetV1 | Intron hairpin Bet Knockdown construct | kan | nptII | link | |
| BBa_K382070 | ihpRNA LTP | Intron hairpin LTP Knockdown construct | kan | pat | link | |
| BBa_K382071 | ihpRNA LTP | Intron hairpin LTP Knockdown construct | kan | nptII | link |
