Team:USTC/Modeling/a

From 2010.igem.org

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(Hypothesis)
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I)Pdu N is the '''vertex''' and its '''pentametic structures''' https://static.igem.org/mediawiki/2010/5/55/USTC2010_hypothesis_N_vertex.jpg
I)Pdu N is the '''vertex''' and its '''pentametic structures''' https://static.igem.org/mediawiki/2010/5/55/USTC2010_hypothesis_N_vertex.jpg
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for its identity with a proved vertex pentametic protein---CcmL. [http://www.ncbi.nlm.nih.gov/pubmed/18292340]  
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for its identity with a proved vertex pentametic protein---CcmL. [http://www.ncbi.nlm.nih.gov/pubmed/18292340]
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Figure 2| A diagram showing the construction of a large icosahedron from many smaller hexagons and 12 pentagons at the vertices. The figure shown has a triangulation number (T) of 75 (29). [http://www.ncbi.nlm.nih.gov/pubmed/18292340 [4]]
== Results ==
== Results ==

Revision as of 01:15, 25 October 2010

An Integrated Platform Based on Bacterial Microcompartment for de novo Proteinaceous Artificial Organelles

Known Conditions

This table illustrate some basic information of pdu shell protein family.[http://www.ncbi.nlm.nih.gov/pubmed/20417607]


USTC2010_known_conditions_table_1.jpg

Table 1| Basic information of pdu shell protein family.


USTC2010_known_conditions_figure_1.jpg

Figure 1| 3-dimension structure of the known shell proteins from Salmonella enterica . UPPER: pduU. [http://www.ncbi.nlm.nih.gov/pubmed/18786396] MIDDLE: pduA. [http://www.ncbi.nlm.nih.gov/pubmed/20870711] DOWN:pduT. [http://www.ncbi.nlm.nih.gov/pubmed/20870711 [3]]

Hypothesis

I)Pdu N is the vertex and its pentametic structures USTC2010_hypothesis_N_vertex.jpg

for its identity with a proved vertex pentametic protein---CcmL. [http://www.ncbi.nlm.nih.gov/pubmed/18292340]


Figure 2| A diagram showing the construction of a large icosahedron from many smaller hexagons and 12 pentagons at the vertices. The figure shown has a triangulation number (T) of 75 (29). [http://www.ncbi.nlm.nih.gov/pubmed/18292340 [4]]

Results

Conclusion

Reference

[1] Martin J. Warren, et al. 2010. Synthesis of empty bacterial microcompartments, directed organelle protein incorporation, and evidence of filament-associated organelle movement. Molecular Cell. 2010 Apr 38 (2), 305–315

[2] Structure of the PduU shell protein from the Pdu microcompartment of Salmonella. Structure. 2008 Sep 16(9):1324-32

[3] Structural insights into the mechanisms of transport across the Salmonella enterica Pdu microcompartment shell. J Biol Chem. 2010 Sep: [Epub ahead of print]

[4] Atomic-level models of the bacterial carboxysome shell. Science. 2008 Feb, 319(5866):1083-6