Team:Groningen/Modeling

From 2010.igem.org

(Difference between revisions)
Line 1: Line 1:
-
The modelling time is developping a mathematical model which describes the growth of the biofilm.  
+
The modelling time is developing a mathematical model which describes the growth of biofilms.  
-
Furthermore we're researching how strong the biofilm is, and the speed of the growth. Discrete model of hydrophobic growth.
+
Furthermore we are researching how strong the biofilm is, how fast it grows and other parameters needed fot the model.  
-
We're going to use the differential descrete cellular automaton approach which means that we are using as well discrete as well continous models to determine what's going to happen. This is an more used model to simulate biofilms
+
 
 +
In the literature we found models that described biofilms in by a so called differential discrete cellular automaton approach. This means that we are using both discrete and continous models to determine what is happening in our biofim.
 +
 
 +
The approach we are taking now mainly based on articles from C.Picioreanu, M.C.M. van Loosdrecht and J.J. Heijnen. The most useful articles we found are:
 +
 
 +
Picioreanu C, van Loosdrecht MC, Heijnen JJ.A new combined differential-discrete cellular automaton approach for biofilm modeling: application for growth in gel beads, Biotechnology Bioengineering 1998 Mar 20;57(6):718-31.
 +
http://www.ncbi.nlm.nih.gov/pubmed/10099251
 +
 
 +
Picioreanu C, van Loosdrecht MC, Heijnen JJ. Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach, Biotechnology Bioengineering 1998 Apr 5;58(1):101-16.
 +
http://www.ncbi.nlm.nih.gov/pubmed/10099266

Revision as of 08:42, 22 July 2010

The modelling time is developing a mathematical model which describes the growth of biofilms. Furthermore we are researching how strong the biofilm is, how fast it grows and other parameters needed fot the model.

In the literature we found models that described biofilms in by a so called differential discrete cellular automaton approach. This means that we are using both discrete and continous models to determine what is happening in our biofim.

The approach we are taking now mainly based on articles from C.Picioreanu, M.C.M. van Loosdrecht and J.J. Heijnen. The most useful articles we found are:

Picioreanu C, van Loosdrecht MC, Heijnen JJ.A new combined differential-discrete cellular automaton approach for biofilm modeling: application for growth in gel beads, Biotechnology Bioengineering 1998 Mar 20;57(6):718-31. http://www.ncbi.nlm.nih.gov/pubmed/10099251

Picioreanu C, van Loosdrecht MC, Heijnen JJ. Mathematical modeling of biofilm structure with a hybrid differential-discrete cellular automaton approach, Biotechnology Bioengineering 1998 Apr 5;58(1):101-16. http://www.ncbi.nlm.nih.gov/pubmed/10099266