"
Team:UT-Tokyo/Sudoku modeling
From 2010.igem.org
(Difference between revisions)
(→4C3leak switch) |
(→4C3leak switch) |
||
| Line 21: | Line 21: | ||
r1,r2,r3,r4 : concentration of 4 recombinass mRNA | r1,r2,r3,r4 : concentration of 4 recombinass mRNA | ||
| + | |||
pc,rc : concentration of cre recombinase protein and mRNA | pc,rc : concentration of cre recombinase protein and mRNA | ||
| + | |||
ps,rs : concentration of SP6 polymerase protein and mRNA | ps,rs : concentration of SP6 polymerase protein and mRNA | ||
| + | |||
| + | Besides, we treated DNA as continuous variabl, since there could be hundreds of plasmid in one E.coli (multicopy plasmid). | ||
==='''equation'''=== | ==='''equation'''=== | ||
Revision as of 15:09, 27 October 2010
Sudoku
Introduction System Modeling Lab note Result Reference
4C3leak switch
We modeled our 4C3 leak switch as ODE system.
Variable
Basically, "pn" denotes for protein concentration and "rn" denotes for mRNA concentration
p1,p2,p3,p4 : concentration of 4 recombinase protein
r1,r2,r3,r4 : concentration of 4 recombinass mRNA
pc,rc : concentration of cre recombinase protein and mRNA
ps,rs : concentration of SP6 polymerase protein and mRNA
Besides, we treated DNA as continuous variabl, since there could be hundreds of plasmid in one E.coli (multicopy plasmid).
equation
parameters
MS2 phage infection
Whole system
Copyright © 2010 iGEM UT-Tokyo. All rights reserved.
