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- | {{Template:HokkaidoU_Japan}} | + | {{Template:HokkaidoU_Japan}}<div class="linkbar"><div class="prev">[[Team:HokkaidoU_Japan/Notebook/September15|September 15]]</div>[[Team:HokkaidoU_Japan/Notebook|Notebook]]<div class="next">[[Team:HokkaidoU_Japan/Notebook/September17|September 17]]</div></div> |
- | *digestion of GFP(1-14K) and double terminator(1-23L)
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- | == Digestion of GFP and Double Terminator == | + | |
- | Parts Information
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- | GFP : BBa_E0040 1-14K 720bp pSB1A3
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- | double terminator : BBa_B0015 1-23L 129bp pSB1AK3
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- | pSB1A3
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- | 1-14K and pSB1A3 had purified with mycrocon, and 1-23L had extracted from a gel before.
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- | Method
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- | 1)electrophoresed 1μl of 1-14K and 1-23L added 0.5μl of 6×sample buffer to estimate concentration of each solution.
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- | 2)estimated concentration from photo of electrophoresys.But I forgot to electrophorese pSB1A3 solution with the other samples,so pSB1A3 solution was done by other person.
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- | estimates of concentration
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- | 1-14K:200ng/μl
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- | 1-23L:120ng/μl
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- | pSB1A3:2.5ng/μl
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- | 3)made digestion recipes based on each concentrations.Why pSB1A3 recipe is two,because I firstly made 30μl of pSB1A3 solution,but I found it was insufficient to ligate parts,so I made more 50μl of it after.
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- | 1-23L0.5μl
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- | M-buffer5 μl
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- | 0.1%BSA5 μl
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- | Xba4 μl
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- | Pst0.5μl
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- | DW35μl
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- | 1-14K1.5μl
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- | H-buffer2 μl
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- | 0.1%BSA2 μl
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- | Eco1 μl
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- | Spe0.5μl
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- | DW13μl
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- | pSB1A320μl
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- | H-buffer3μl
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- | 0.1%BSA3 μl
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- | Eco0.5 μl
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- | Pst0.5μl
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- | DW3μl
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- | pSB1A330μl
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- | H-buffer5μl
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- | 0.1%BSA5μl
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- | Eco0.5 μl
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- | Pst0.5μl
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- | DW9μl
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- | 4)put each solutions into 37℃ incubator.1-23L solution was put about a half and two hours,1-14K solution was done about a half and an hour,30μl of pSB1A3 solution was done about an hour,and 50μl of pSB1A3 was done about a half hour.
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- | 5)electrophoresed each solutions added 6×sample buffer.put 12μls each into wells of a gel.
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- | 1:λ/HindⅢ EcoRⅠ
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- | 2~3:1-14K
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- | 4~8:1-23L
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- | 9~16:pSB1A3
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- | 6)cannot see 1-23L because of overflowing.extracted the other samples from a gel.dissolve them with 50μl of Nuclease free water.And they were stocked to freeze in -20℃.
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- | 6)
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Latest revision as of 17:35, 19 September 2010