Team:UNIPV-Pavia/Material Methods/Measurements/Tecan/test10settembre bis

From 2010.igem.org

(Difference between revisions)

Latest revision as of 10:27, 23 October 2010

SEPTEMBER, 10TH

PLATE

EXPERIMENT DESCRIPTION

Motivation

The experiment was performed to measure the 3OC6-HSL concentration due to the synthesis of homoserine-lactone by 3OC6-HSL generators in saturation phase of the cultures growth.

Methods

According to Protocol 3 the experiment was performed in LB on the following signalling parts:

<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300030</partinfo> (wiki name: I14)
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300028</partinfo> (wiki name: I15)
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300029</partinfo> (wiki name: I16)
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300025</partinfo> (wiki name: I17)
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300026</partinfo> (wiki name: I18)
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300027</partinfo> (wiki name: I19)
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300030</partinfo> (wiki name: I14-4C5)
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300028</partinfo> (wiki name: I15-4C5)
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300029</partinfo> (wiki name: I16-4C5)
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300025</partinfo> (wiki name: I17-4C5)
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300026</partinfo> (wiki name: I18-4C5)
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300027</partinfo> (wiki name: I19-4C5)
<partinfo>pSB1A2</partinfo> - <partinfo>BBa_B0031</partinfo> (negative control)
<partinfo>pSB1AK3</partinfo> - <partinfo>BBa_K300009</partinfo> (negative control)

Supernatants were properly diluted in order to evaluate the production of 3OC6-HSL of the low copy number parts.

RESULTS

The 3OC6-HSL concentrations of several cultures were evaluated:

Concentrations of 3OC6-HSL were obtained multiplying the values read on the graphics for the corresponding dilution factor.

Part	3OC6-HSL concentration [uM]
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300030</partinfo>	~0.4
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300028</partinfo>	~0.02
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300025</partinfo>	~0.1
<partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300027</partinfo>	~0.002
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300030</partinfo>	~0.005
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300028</partinfo>	~0.002
<partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300025</partinfo>	~0.003

Tecan Test

@@ Line 11: / Line 11: @@
 <td valign="top">
 <table border="0" align="center" width="100%"><tr><td align="justify" valign="top" style="padding:20px">
-<html><p align="center"><font size="5"><b>19° TEST</b></font><br><br><font size="4">[SEPTEMBER, 10TH]</font></p></html><hr><br>
+<html><p align="center"><font size="5"><b>SEPTEMBER, 10TH</b></font></p></html><hr><br>
 ==PLATE==
 <br>
@@ Line 39: / Line 39: @@
 * <partinfo>pSB1A2</partinfo> - <partinfo>BBa_B0031</partinfo> (negative control)
 * <partinfo>pSB1AK3</partinfo> - <partinfo>BBa_K300009</partinfo> (negative control)
-* <partinfo>pSB1A3</partinfo> - <partinfo>BBa_K</partinfo> (negative control)
-==RESULTS (?)==
+Supernatants were properly diluted in order to evaluate the production of 3OC6-HSL of the low copy number parts.
+==RESULTS==
+The 3OC6-HSL concentrations of several cultures were evaluated:
+[[Image:UNIPV_Pavia_Serie110.png| 620px | center ]]
+[[Image:UNIPV_Pavia_Serie210.png| 620px | center ]]
+[[Image:UNIPV_Pavia_Serie310.png| 620px | center ]]
+Concentrations of 3OC6-HSL were obtained multiplying the values read on the graphics for the corresponding dilution factor.
+{|border='1' align='center'
+|| Part || 3OC6-HSL concentration [uM]
+|-
+|| <partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300030</partinfo> || ~0.4
+|-
+|| <partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300028</partinfo> || ~0.02
+|-
+|| <partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300025</partinfo> || ~0.1
+|-
+|| <partinfo>BBa_J61002</partinfo> - <partinfo>BBa_K300027</partinfo> || ~0.002
+|-
+|| <partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300030</partinfo> || ~0.005
+|-
+|| <partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300028</partinfo> || ~0.002
+|-
+|| <partinfo>pSB4C5</partinfo> - <partinfo>BBa_K300025</partinfo> || ~0.003
+|}
 <!-- table previous next test -->
@@ Line 58: / Line 91: @@
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-{{UNIPV_Pavia/Menu_measurment}}
+{{UNIPV-Pavia/Menu_measurments}}
 </td>
 </table>